RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 BOKQ9UMX3 212 aaPredicted RBP9.73□□□□□ -0.85
NELFE-213ENST00000494956 EXO1Q9UQ84 846 aaKnown RBP9.73□□□□□ -0.85
NELFE-213ENST00000494956 ZNF780BQ9Y6R6 833 aa9.73□□□□□ -0.85
NELFE-213ENST00000494956 PCNX3Q9H6A9 2034 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 FBN2P35556 2912 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 TMEM233B4DJY2 109 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 AQP7O14520 342 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 SPAG7O75391 227 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 PPM1BO75688 479 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 TRAPPC6AO75865 159 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 COX6B1P14854 86 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 CREB1P16220 341 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 AGAP20933 346 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 GDF1P27539 372 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 ADH7P40394 386 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 PTGDSP41222 190 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 CCT5P48643 541 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 C2orf80Q0P641 193 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 IMPG1Q17R60 797 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 CCDC153Q494R4 210 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 SPIN4Q56A73 249 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 ZNF628Q5EBL2 1059 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 CFAP157Q5JU67 520 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 TMEM198Q66K66 360 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 NPSR1Q6W5P4 371 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 WDR53Q7Z5U6 358 aaPredicted RBP9.72□□□□□ -0.85
NELFE-213ENST00000494956 TICAM1Q8IUC6 712 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 LIX1LQ8IVB5 337 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 GBP7Q8N8V2 638 aaPredicted RBP9.72□□□□□ -0.85
NELFE-213ENST00000494956 OR7G2Q8NG99 324 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 OR4N2Q8NGD1 307 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 OR10Q1Q8NGQ4 319 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 OR2T11Q8NH01 316 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 RND1Q92730 232 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 HGDQ93099 445 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 GFM2Q969S9 779 aaKnown RBP9.72□□□□□ -0.85
NELFE-213ENST00000494956 EGLN2Q96KS0 407 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 ZNF597Q96LX8 424 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 TTYH2Q9BSA4 534 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 GATA5Q9BWX5 397 aaPredicted RBP9.72□□□□□ -0.85
NELFE-213ENST00000494956 ANGPTL4Q9BY76 406 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 TRIM8Q9BZR9 551 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 SLC24A3Q9HC58 644 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 PSME2Q9UL46 239 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 GRID1Q9ULK0 1009 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 STK38LQ9Y2H1 464 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 SLC6A5Q9Y345 797 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 CCL27Q9Y4X3 112 aa9.72□□□□□ -0.85
NELFE-213ENST00000494956 INTS1Q8N201 2190 aaKnown RBP9.71□□□□□ -0.85
NELFE-213ENST00000494956 SERTM1A2A2V5 107 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 TP53I11O14683 189 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 SUSD5O60279 629 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 CDH16O75309 829 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 UGT2B11O75310 529 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 CRCPO75575 148 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 JUNP05412 331 aaKnown RBP9.71□□□□□ -0.86
NELFE-213ENST00000494956 CHRNGP07510 517 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 GLI4P10075 376 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 DRD2P14416 443 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 TACR1P25103 407 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 ACVR2AP27037 513 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 ALDH3A1P30838 453 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 MASP1P48740 699 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 NRG3P56975 720 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 DNAJB13P59910 316 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 KRTAP10-9P60411 292 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 PLCXD2Q0VAA5 305 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 SNTB1Q13884 538 aaKnown RBP9.71□□□□□ -0.86
NELFE-213ENST00000494956 TOMM20Q15388 145 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 EIPR1Q53HC9 387 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 WIPI1Q5MNZ9 446 aaPredicted RBP9.71□□□□□ -0.86
NELFE-213ENST00000494956 DCST1Q5T197 706 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 LIPMQ5VYY2 423 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 TMEM211Q6ICI0 200 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 FAM71E1Q6IPT2 247 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 ANKRD26P1Q6NSI1 321 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 GALNT18Q6P9A2 607 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 ZCCHC23Q6ZST2 131 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 SEM1Q6ZVN7 128 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 TRABD2AQ86V40 505 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 DND1Q8IYX4 353 aaKnown RBP9.71□□□□□ -0.86
NELFE-213ENST00000494956 BANPQ8N9N5 519 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 NEIL3Q8TAT5 605 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 RDH11Q8TC12 318 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 ZNF675Q8TD23 568 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 TMBIM1Q969X1 311 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 CCDC126Q96EE4 140 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 LCORQ96JN0 433 aaPredicted RBP9.71□□□□□ -0.86
NELFE-213ENST00000494956 FAM111AQ96PZ2 611 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 UBQLN3Q9H347 655 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 TUBB1Q9H4B7 451 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 METTL7AQ9H8H3 244 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 FOLH1BQ9HBA9 442 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 CHST11Q9NPF2 352 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 SLC35C2Q9NQQ7 365 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 NPDC1Q9NQX5 325 aaPredicted RBP9.71□□□□□ -0.86
NELFE-213ENST00000494956 COQ3Q9NZJ6 369 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 GIMAP2Q9UG22 337 aa9.71□□□□□ -0.86
NELFE-213ENST00000494956 C15orf38-AP3S2A0A0A6YYH1 394 aa9.7□□□□□ -0.86
NELFE-213ENST00000494956 A0A0G2JNJ9 132 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms