RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	TMED5	Q9Y3A6	229 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	CCL27	Q9Y4X3	112 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	FBN2	P35556	2912 aa		11.74	□□□□□ -0.53
FDPS-204	ENST00000461507	OR6C76	A6NM76	312 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507		E9PLN8	166 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507		G3V3Y1	287 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	PDPK1	O15530	556 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	DNAJC13	O75165	2243 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	SNUPN	O95149	360 aa	Known RBP	11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	IGKV3-11	P04433	115 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	ATP1B1	P05026	303 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	PCSK2	P16519	638 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	PRPH2	P23942	346 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	HTR1E	P28566	365 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	GALNS	P34059	522 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	MPI	P34949	423 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	NR0B1	P51843	470 aa	Known RBP	11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	SLC37A1	P57057	533 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	GPR85	P60893	370 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	HSF1	Q00613	529 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	HSPB3	Q12988	150 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	EBP	Q15125	230 aa	Known RBP	11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	UGT3A2	Q3SY77	523 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	FAM71E1	Q6IPT2	247 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	OPN5	Q6U736	354 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	RNF165	Q6ZSG1	346 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	SULF2	Q8IWU5	870 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	MCEMP1	Q8IX19	187 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	KIRREL3	Q8IZU9	778 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	TAGAP	Q8N103	731 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	FAM13C	Q8NE31	585 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	OR52R1	Q8NGF1	315 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	OR8K3	Q8NH51	312 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	NUBPL	Q8TB37	319 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	METTL2A	Q96IZ6	378 aa	Known RBP	11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	PHF12	Q96QT6	1004 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	VKORC1	Q9BQB6	163 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	C20orf27	Q9GZN8	174 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	VIPAS39	Q9H9C1	493 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	TIMMDC1	Q9NPL8	285 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	PNPO	Q9NVS9	261 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	SIRT5	Q9NXA8	310 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	MAT2B	Q9NZL9	334 aa		11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	EIF3L	Q9Y262	564 aa	Known RBP	11.73	□□□□□ -0.53
FDPS-204	ENST00000461507	PHF3	Q92576	2039 aa	Known RBP	11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	KLRC4-KLRK1	H3BQV0	150 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	PEX1	O43933	1283 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	CLDN14	O95500	239 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	ESRRA	P11474	423 aa	Predicted RBP	11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	BCKDHA	P12694	445 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	ABO	P16442	354 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	DDX5	P17844	614 aa	Known RBP	11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	RFC3	P40938	356 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	ASMT	P46597	345 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	NRG3	P56975	720 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	PLGLB1	Q02325	96 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	ZNF155	Q12901	538 aa	Predicted RBP	11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	MAD2L1	Q13257	205 aa	Predicted RBP	11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	CDSN	Q15517	529 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	PRICKLE4	Q2TBC4	344 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	TRMT12	Q53H54	448 aa	Known RBP	11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	CMPK2	Q5EBM0	449 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	XKR7	Q5GH72	579 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	IL23R	Q5VWK5	629 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	NXN	Q6DKJ4	435 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	TMEM107	Q6UX40	140 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	MDGA2	Q7Z553	956 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	DOLPP1	Q86YN1	238 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	PRR22	Q8IZ63	422 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	EID3	Q8N140	333 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	PSD4	Q8NDX1	1056 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	OR7G1	Q8NGA0	311 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	OR6Y1	Q8NGX8	325 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	ZFP28	Q8NHY6	868 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	LRRC8C	Q8TDW0	803 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	SORT1	Q99523	831 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	ITPA	Q9BY32	194 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	REEP4	Q9H6H4	257 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	ANKRA2	Q9H9E1	313 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	THAP1	Q9NVV9	213 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	EHD3	Q9NZN3	535 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	CFL2	Q9Y281	166 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	EML6	Q6ZMW3	1958 aa		11.72	□□□□□ -0.53
FDPS-204	ENST00000461507	PDZD2	O15018	2839 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	TFEC	O14948	347 aa	Predicted RBP	11.71	□□□□□ -0.53
FDPS-204	ENST00000461507		P04436	131 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	PRPS2	P11908	318 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	EFNA1	P20827	205 aa	Predicted RBP	11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	MC3R	P41968	323 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	SLC18A1	P54219	525 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	PTGR1	Q14914	329 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	KIAA0040	Q15053	153 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	C6orf136	Q5SQH8	315 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	TMEM64	Q6YI46	380 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	RTL4	Q6ZR62	310 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	FAM47E	Q6ZV65	393 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	GDF7	Q7Z4P5	450 aa		11.71	□□□□□ -0.53
FDPS-204	ENST00000461507	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms