RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 ANGPTL8Q6UXH0 198 aa18.94■□□□□ 0.62
CPNE1-219ENST00000440240 C17orf53Q8N3J3 647 aaPredicted RBP18.94■□□□□ 0.62
CPNE1-219ENST00000440240 TRIB1Q96RU8 372 aa18.94■□□□□ 0.62
CPNE1-219ENST00000440240 PAFAH2Q99487 392 aa18.94■□□□□ 0.62
CPNE1-219ENST00000440240 EPB41L4BQ9H329 900 aa18.94■□□□□ 0.62
CPNE1-219ENST00000440240 FARSBQ9NSD9 589 aaKnown RBP18.94■□□□□ 0.62
CPNE1-219ENST00000440240 MAT2BQ9NZL9 334 aa18.94■□□□□ 0.62
CPNE1-219ENST00000440240 DTX4Q9Y2E6 619 aa18.94■□□□□ 0.62
CPNE1-219ENST00000440240 ZNF780BQ9Y6R6 833 aa18.94■□□□□ 0.62
CPNE1-219ENST00000440240 MBD3L4A6NDZ8 208 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 MBD3L3A6NE82 208 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 MBD3L5A6NJ08 208 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 KDM4EB2RXH2 506 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 ICOSLGO75144 302 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 RPS17P08708 135 aaKnown RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 RHOXF2BP0C7M4 288 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 DRD5P21918 477 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 CTSSP25774 331 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 OPRM1P35372 400 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 PPICP45877 212 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 NAGLUP54802 743 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 TRA2BP62995 288 aaKnown RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 GALNT1Q10472 559 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 RCAN2Q14206 197 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 FAM83FQ8NEG4 500 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 MBD3L2Q8NHZ7 208 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 ZPLD1Q8TCW7 415 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 ZNF483Q8TF39 744 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 CTHRC1Q96CG8 243 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 KLHL29Q96CT2 875 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 TMUB1Q9BVT8 246 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 C1QTNF3Q9BXJ4 246 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 CDC42EP4Q9H3Q1 356 aaKnown RBP18.93■□□□□ 0.62
CPNE1-219ENST00000440240 VPS29Q9UBQ0 182 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 PRODH2Q9UF12 536 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 ZNF180Q9UJW8 692 aa18.93■□□□□ 0.62
CPNE1-219ENST00000440240 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.93■□□□□ 0.622e-10■□□□□ 8.4
CPNE1-219ENST00000440240 TUBAL3A6NHL2 446 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 CBR3O75828 277 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 IL18BPO95998 194 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 CPN1P15169 458 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 DNASE1P24855 282 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 CDH13P55290 713 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 PLCXD2Q0VAA5 305 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 EXOSC7Q15024 291 aaKnown RBP18.92■□□□□ 0.62
CPNE1-219ENST00000440240 NNATQ16517 81 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 UBAP2Q5T6F2 1119 aaKnown RBP18.92■□□□□ 0.62
CPNE1-219ENST00000440240 LETMD1Q6P1Q0 360 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 YRDCQ86U90 279 aaKnown RBP18.92■□□□□ 0.62
CPNE1-219ENST00000440240 CDC20BQ86Y33 519 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 HGDQ93099 445 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 OMA1Q96E52 524 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 OSBPL11Q9BXB4 747 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 ITPAQ9BY32 194 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 LIME1Q9H400 295 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 TRPS1Q9UHF7 1281 aa18.92■□□□□ 0.62
CPNE1-219ENST00000440240 EXO1Q9UQ84 846 aaKnown RBP18.92■□□□□ 0.62
CPNE1-219ENST00000440240 MPDZO75970 2070 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 A0A1B0GTL3 188 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 POC1B-GALNT4F8VUJ3 575 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 PPP6CO00743 305 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 SNPHO15079 494 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 BCAS2O75934 225 aaPredicted RBP18.91■□□□□ 0.62
CPNE1-219ENST00000440240 EPXP11678 715 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 CYP4B1P13584 511 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 ALDH9A1P49189 494 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 TRMT12Q53H54 448 aaKnown RBP18.91■□□□□ 0.62
CPNE1-219ENST00000440240 LGSNQ5TDP6 509 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 ENPP6Q6UWR7 440 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 RPS27LQ71UM5 84 aaKnown RBP18.91■□□□□ 0.62
CPNE1-219ENST00000440240 TGIF2LYQ8IUE0 185 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 ADCY4Q8NFM4 1077 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 OR52R1Q8NGF1 315 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 TMCO6Q96DC7 493 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 NODALQ96S42 347 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 KLRF1Q9NZS2 232 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 CBLCQ9ULV8 474 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 PLLPQ9Y342 182 aa18.91■□□□□ 0.62
CPNE1-219ENST00000440240 A8MT66 165 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 TRIM49D1C9J1S8 452 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 TO15178 435 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 CBX7O95931 251 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 KRT6AP02538 564 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 KRT6BP04259 564 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 SNRPAP09012 282 aaKnown RBP18.9■□□□□ 0.62
CPNE1-219ENST00000440240 HSD3B1P14060 373 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 TSPAN8P19075 237 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 TACR1P25103 407 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 HSD3B2P26439 372 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 HSD17B3P37058 310 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 KRT6CP48668 564 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 EMDP50402 254 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 PPP2R2AP63151 447 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 SORDQ00796 357 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 CLCQ05315 142 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 CEBPEQ15744 281 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 WHAMMP3Q1A5X7 153 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 DCST1Q5T197 706 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 FBXW10Q5XX13 1052 aa18.9■□□□□ 0.62
CPNE1-219ENST00000440240 SAMD14Q8IZD0 417 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms