RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 DEFB127Q9H1M4 99 aa18.68■□□□□ 0.58
GTF3A-202ENST00000419181 ANKRA2Q9H9E1 313 aa18.68■□□□□ 0.58
GTF3A-202ENST00000419181 SUCOQ9UBS9 1254 aaKnown RBP18.68■□□□□ 0.58
GTF3A-202ENST00000419181 PRODH2Q9UF12 536 aa18.68■□□□□ 0.58
GTF3A-202ENST00000419181 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.68■□□□□ 0.58
GTF3A-202ENST00000419181 ANKRD33BA6NCL7 494 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 TP53I11O14683 189 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 PIP5K1BO14986 540 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 ACOX3O15254 700 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 PLOD3O60568 738 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 BCAS2O75934 225 aaPredicted RBP18.67■□□□□ 0.58
GTF3A-202ENST00000419181 NAGAP17050 411 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 SDC1P18827 310 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 PTGS2P35354 604 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 MAGEA5P43359 124 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 DCAF7P61962 342 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 RPL38P63173 70 aaKnown RBP18.67■□□□□ 0.58
GTF3A-202ENST00000419181 KCNJ2P63252 427 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 RFTN2Q52LD8 501 aaPredicted RBP18.67■□□□□ 0.58
GTF3A-202ENST00000419181 XKR7Q5GH72 579 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 ARHGAP11AQ6P4F7 1023 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 LRIG3Q6UXM1 1119 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 DDIASQ8IXT1 998 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 PRR22Q8IZ63 422 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 AGR3Q8TD06 166 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 HSPBAP1Q96EW2 488 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 LCORQ96JN0 433 aaPredicted RBP18.67■□□□□ 0.58
GTF3A-202ENST00000419181 PKNOX2Q96KN3 472 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 BBS4Q96RK4 519 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 SECISBP2Q96T21 854 aaKnown RBP18.67■□□□□ 0.58
GTF3A-202ENST00000419181 CENPHQ9H3R5 247 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 TMED5Q9Y3A6 229 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 ACTL7BQ9Y614 415 aa18.67■□□□□ 0.58
GTF3A-202ENST00000419181 NCOA6Q14686 2063 aaPredicted RBP18.67■□□□□ 0.58
GTF3A-202ENST00000419181 NCKAP5O14513 1909 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 LRRC3CA6NJW4 275 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 TM9SF1O15321 606 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 PPM1BO75688 479 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 PDE9AO76083 593 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 LRATO95237 230 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 IGHG3P01860 377 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 DHRS4L1P0CG22 281 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 DRD5P21918 477 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 PPICP45877 212 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 TBCELQ5QJ74 424 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 CES4AQ5XG92 561 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 PAOXQ6QHF9 649 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 DOLPP1Q86YN1 238 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 NUDCD3Q8IVD9 361 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 OR7G2Q8NG99 324 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 FAM57AQ8TBR7 257 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 SPPL2AQ8TCT8 520 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 DIO2Q92813 273 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 ZBTB9Q96C00 473 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 ZNF764Q96H86 408 aaPredicted RBP18.66■□□□□ 0.58
GTF3A-202ENST00000419181 DOHHQ9BU89 302 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 ZFP64Q9NPA5 681 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 ZDHHC2Q9UIJ5 367 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 BOKQ9UMX3 212 aaPredicted RBP18.66■□□□□ 0.58
GTF3A-202ENST00000419181 GPR55Q9Y2T6 319 aaPredicted RBP18.66■□□□□ 0.58
GTF3A-202ENST00000419181 MEMO1Q9Y316 297 aa18.66■□□□□ 0.58
GTF3A-202ENST00000419181 NAV2Q8IVL1 2488 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 NBPF19A0A087WUL8 3843 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 FRG2CA6NGY1 282 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 PRRG2O14669 202 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 TO15178 435 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 BIRC5O15392 142 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 SLITRK5O94991 958 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 JUNP05412 331 aaKnown RBP18.65■□□□□ 0.58
GTF3A-202ENST00000419181 ABCB1P08183 1280 aaPredicted RBP18.65■□□□□ 0.58
GTF3A-202ENST00000419181 NCBP2P52298 156 aaKnown RBP eCLIP18.65■□□□□ 0.58
GTF3A-202ENST00000419181 MPP2Q14168 576 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 GALNTL6Q49A17 601 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 ITLN2Q8WWU7 325 aaPredicted RBP18.65■□□□□ 0.58
GTF3A-202ENST00000419181 VSTM2LQ96N03 204 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 BTBD9Q96Q07 612 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 PHF12Q96QT6 1004 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 STMN4Q9H169 189 aaPredicted RBP18.65■□□□□ 0.58
GTF3A-202ENST00000419181 GLIPR2Q9H4G4 154 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 ZNF703Q9H7S9 590 aaPredicted RBP18.65■□□□□ 0.58
GTF3A-202ENST00000419181 LIPGQ9Y5X9 500 aa18.65■□□□□ 0.58
GTF3A-202ENST00000419181 CENPEQ02224 2701 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 A0A087WV62 115 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 TRIM3O75382 744 aaPredicted RBP18.64■□□□□ 0.57
GTF3A-202ENST00000419181 NME6O75414 186 aaPredicted RBP18.64■□□□□ 0.57
GTF3A-202ENST00000419181 SERPINE1P05121 402 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 CELA3AP09093 270 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 RFPL3SP0C7P2 107 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 ESRRAP11474 423 aaPredicted RBP18.64■□□□□ 0.57
GTF3A-202ENST00000419181 NTSP30990 170 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 RPP38P78345 283 aaKnown RBP18.64■□□□□ 0.57
GTF3A-202ENST00000419181 ADORA2A-AS1P86434 159 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 PLCXD2Q0VAA5 305 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 BICRALQ6AI39 1079 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 RPTNQ6XPR3 784 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 CD163Q86VB7 1156 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 PPP1R14CQ8TAE6 165 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 HGDQ93099 445 aa18.64■□□□□ 0.57
GTF3A-202ENST00000419181 GFM2Q969S9 779 aaKnown RBP18.64■□□□□ 0.57
GTF3A-202ENST00000419181 NTNG2Q96CW9 530 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms