RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TXNL1O43396 289 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 CTBP2P56545 445 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 INHBEP58166 350 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 NRMQ8IXM6 262 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 TESCQ96BS2 214 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 MYH15Q9Y2K3 1946 aa11.48□□□□□ -0.57
UBR4-205ENST00000417040 C2orf78A6NCI8 922 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 LEFTY2O00292 366 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 AHSA1O95433 338 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 KNG1P01042 644 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 JUPP14923 745 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 NDUFV2P19404 249 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 DCKP27707 260 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 PRDX3P30048 256 aaKnown RBP11.47□□□□□ -0.57
UBR4-205ENST00000417040 GDI1P31150 447 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 KCTD20Q7Z5Y7 419 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 TMEM135Q86UB9 458 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 DNAJC5GQ8N7S2 189 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 TMEM185AQ8NFB2 350 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 OR4D6Q8NGJ1 314 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 OR5W2Q8NH69 310 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 BCL7BQ9BQE9 202 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 FAM83CQ9BQN1 747 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 MROQ9BYG7 248 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 DPH1Q9BZG8 443 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 CSNK1G3Q9Y6M4 447 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 J3KTA2 159 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 CSTAP01040 98 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 APEHP13798 732 aaKnown RBP11.47□□□□□ -0.57
UBR4-205ENST00000417040 FGL1Q08830 312 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 RAB11BQ15907 218 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 LMX1AQ8TE12 382 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 L3HYPDHQ96EM0 354 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 OR5B12Q96R08 314 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 PAAF1Q9BRP4 392 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 THAP7Q9BT49 309 aaPredicted RBP11.47□□□□□ -0.57
UBR4-205ENST00000417040 SORBS1Q9BX66 1292 aaKnown RBP11.47□□□□□ -0.57
UBR4-205ENST00000417040 ASB3Q9Y575 518 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 CAMTA1Q9Y6Y1 1673 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 CYP17A1P05093 508 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 ACPPP15309 386 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 PSMB10P40306 273 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 PHF19Q5T6S3 580 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 ZNF767PQ75MW2 155 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 DCUN1D3Q8IWE4 304 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 TFAP2CQ92754 450 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 DKKL1Q9UK85 242 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 PIRO00625 290 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 LATO43561 262 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 GCAP28676 217 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 DCTP40126 519 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 RAB4BP61018 213 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 KCNC3Q14003 757 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 SMN1Q16637 294 aaKnown RBP11.47□□□□□ -0.57
UBR4-205ENST00000417040 ZNF551Q7Z340 670 aaPredicted RBP11.47□□□□□ -0.57
UBR4-205ENST00000417040 P4HA3Q7Z4N8 544 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 CNOT9Q92600 299 aaKnown RBP11.47□□□□□ -0.57
UBR4-205ENST00000417040 MMABQ96EY8 250 aaPredicted RBP11.47□□□□□ -0.57
UBR4-205ENST00000417040 SLC7A7Q9UM01 511 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 PPP6CO00743 305 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 FRS3O43559 492 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 ASGR2P07307 311 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 ZNF30P17039 623 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 PFKLP17858 780 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 ADH6P28332 368 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 DLSTP36957 453 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 KCNC1P48547 511 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 SGSHP51688 502 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 RGNQ15493 299 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 PPP2R2DQ66LE6 453 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 CYB561A3Q8NBI2 242 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 C16orf78Q8WTQ4 265 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 C3orf30Q96M34 536 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 SULT4A1Q9BR01 284 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 SMIM3Q9BZL3 60 aa11.47□□□□□ -0.57
UBR4-205ENST00000417040 MTMR11A4FU01 709 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 SLC22A5O76082 557 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 LATS1O95835 1130 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 IFNA5P01569 189 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 M6PRP20645 277 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 EPHA1P21709 976 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 ALDH3B2P48448 385 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 SLC11A1P49279 550 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 SOX4Q06945 474 aaPredicted RBP11.46□□□□□ -0.57
UBR4-205ENST00000417040 PIN1Q13526 163 aaPredicted RBP11.46□□□□□ -0.57
UBR4-205ENST00000417040 AWAT2Q6E213 333 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 TMEM225Q6GV28 225 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 RNF175Q8N4F7 328 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 ACBD4Q8NC06 268 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 NPLOC4Q8TAT6 608 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 SORCS1Q8WY21 1168 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 SLC41A3Q96GZ6 507 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 SGIP1Q9BQI5 828 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 BIN3Q9NQY0 253 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 TMEM45AQ9NWC5 275 aa11.46□□□□□ -0.57
UBR4-205ENST00000417040 BAZ2AQ9UIF9 1905 aaKnown RBP11.46□□□□□ -0.57
UBR4-205ENST00000417040 OTOL1A6NHN0 477 aaPredicted RBP11.46□□□□□ -0.57
UBR4-205ENST00000417040 ERCC1P07992 297 aaPredicted RBP11.46□□□□□ -0.57
UBR4-205ENST00000417040 ADORA3P0DMS8 318 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms