RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ADAP2Q9NPF8 381 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 KLHL28Q9NXS3 571 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 TAS2R7Q9NYW3 318 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ZNF282Q9UDV7 671 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 TAC3Q9UHF0 121 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 TANC1Q9C0D5 1861 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 TPRP12270 2363 aaKnown RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 A0A0G2JPF8 293 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 TMEM202A6NGA9 273 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 HNRNPCL3B7ZW38 293 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 H7BY64 318 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 RFPL3O75679 317 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 RAB36O95755 333 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 HNRNPCL4P0DMR1 293 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 GNSP15586 552 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 GABRR2P28476 465 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 PDHA2P29803 388 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 RFX2P48378 723 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 OR10A3P58181 314 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 PSMA6P60900 246 aaKnown RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 RRAS2P62070 204 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 CBLL1Q75N03 491 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 OR4N5Q8IXE1 308 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 TOR1AIP2Q8NFQ8 470 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 OR13C5Q8NGS8 318 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 CMTM7Q96FZ5 175 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 HYLS1Q96M11 299 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 PRAP1Q96NZ9 151 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 THAP7Q9BT49 309 aaPredicted RBP8.36□□□□□ -1.07
RTN4-206ENST00000394611 BARHL1Q9BZE3 327 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ABCG4Q9H172 646 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 SLC39A1Q9NY26 324 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 TAS2R3Q9NYW6 316 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 KCNN3Q9UGI6 736 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 ENOPH1Q9UHY7 261 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 AP3M1Q9Y2T2 418 aa8.36□□□□□ -1.07
RTN4-206ENST00000394611 SCN3AQ9NY46 2000 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 TNRC18O15417 2968 aaPredicted RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 NPIPA5A0A0B4J1W7 369 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 LOC285095A0A1B0GVY8 99 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 TCRBV16S1A1N1A0A5B0 115 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 ZNF860A6NHJ4 632 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 NPIPA7E9PJI5 369 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 ARPC1BO15143 372 aaKnown RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 DOK2O60496 412 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 DNAJB5O75953 348 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 NPIPA8P0DM63 369 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 SHC1P29353 583 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 CD79BP40259 229 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 STAT5AP42229 794 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 CTSOP43234 321 aaPredicted RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 MTNR1AP48039 350 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 EPHA5P54756 1037 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 PSPHP78330 225 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 SSX1Q16384 188 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 COMMD6Q7Z4G1 85 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 SIMC1Q8NDZ2 872 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 MOSPD2Q8NHP6 518 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 SNX33Q8WV41 574 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 SPRYD4Q8WW59 207 aaPredicted RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 LINC01599Q8WXQ3 324 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 RADILQ96JH8 1075 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 TEFMQ96QE5 360 aaKnown RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 ZNF559Q9BR84 538 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 C7orf50Q9BRJ6 194 aaKnown RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 SEC22CQ9BRL7 303 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 SEMA4CQ9C0C4 833 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 ZNF768Q9H5H4 540 aaKnown RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 B4GALT6Q9UBX8 382 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 EXO1Q9UQ84 846 aaKnown RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 FARSAQ9Y285 508 aaKnown RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 NTNG1Q9Y2I2 539 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 PIKFYVEQ9Y2I7 2098 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 GTPBP1O00178 669 aaKnown RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 ETHE1O95571 254 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 AMD1P17707 334 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 RPL9P32969 192 aaKnown RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 MAGEA2P43356 314 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 NCBP2P52298 156 aaKnown RBP eCLIP8.35□□□□□ -1.07
RTN4-206ENST00000394611 HYAL2Q12891 473 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 SQSTM1Q13501 440 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 KLHL22Q53GT1 634 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 GALNTL5Q7Z4T8 443 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 KIF18BQ86Y91 864 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 POGLUT1Q8NBL1 392 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 CASTOR1Q8WTX7 329 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 OPALINQ96PE5 141 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 RTP3Q9BQQ7 232 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 OR2S2Q9NQN1 319 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 FAM86C1Q9NVL1 165 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 SLC25A13Q9UJS0 675 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 TMEM5Q9Y2B1 443 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 MED16Q9Y2X0 877 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 OARD1Q9Y530 152 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 ZNF638Q14966 1978 aaKnown RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 UBE2QL1A1L167 161 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 ZNF705EA8MWA4 302 aaPredicted RBP8.35□□□□□ -1.07
RTN4-206ENST00000394611 HHLA1C9JL84 531 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 S100A6P06703 90 aa8.35□□□□□ -1.07
RTN4-206ENST00000394611 DDOSTP39656 456 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms