RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ST13P50502 369 aaKnown RBP17.07■□□□□ 0.32
CHTOP-202ENST00000368687 MRPS35P82673 323 aaKnown RBP17.07■□□□□ 0.32
CHTOP-202ENST00000368687 PMP22Q01453 160 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 EMX2Q04743 252 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 DUSP2Q05923 314 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 EXOSC7Q15024 291 aaKnown RBP17.07■□□□□ 0.32
CHTOP-202ENST00000368687 CES4AQ5XG92 561 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 FAM180BQ6P0A1 224 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 LYPD8Q6UX82 237 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 FAM47EQ6ZV65 393 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 SLC22A16Q86VW1 577 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 LIX1Q8N485 282 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 CPSF7Q8N684 471 aaKnown RBP17.07■□□□□ 0.32
CHTOP-202ENST00000368687 FAM13CQ8NE31 585 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 OR2M7Q8NG81 312 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 PRR7Q8TB68 274 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 DOK4Q8TEW6 326 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 C3orf30Q96M34 536 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 BTBD9Q96Q07 612 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 SH3GL2Q99962 352 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 MANSC1Q9H8J5 431 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 SH2D2AQ9NP31 389 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 DDX18Q9NVP1 670 aaKnown RBP17.07■□□□□ 0.32
CHTOP-202ENST00000368687 EXO1Q9UQ84 846 aaKnown RBP17.07■□□□□ 0.32
CHTOP-202ENST00000368687 EXPH5Q8NEV8 1989 aa17.07■□□□□ 0.32
CHTOP-202ENST00000368687 ANKRD33BA6NCL7 494 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 TRPC5OSA6NMA1 111 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 SCAMP2O15127 329 aaKnown RBP17.06■□□□□ 0.32
CHTOP-202ENST00000368687 TO15178 435 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 SNNO75324 88 aaPredicted RBP17.06■□□□□ 0.32
CHTOP-202ENST00000368687 MST1P26927 711 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 ABCD3P28288 659 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 CASP6P55212 293 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 C21orf58P58505 322 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 MRPS22P82650 360 aaKnown RBP17.06■□□□□ 0.32
CHTOP-202ENST00000368687 UBAP2LQ14157 1087 aaKnown RBP17.06■□□□□ 0.32
CHTOP-202ENST00000368687 ZNHIT3Q15649 155 aaPredicted RBP17.06■□□□□ 0.32
CHTOP-202ENST00000368687 IL23RQ5VWK5 629 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 PAOXQ6QHF9 649 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 SIAH3Q8IW03 269 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 GHDCQ8N2G8 530 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 OR2L13Q8N349 312 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 KAT2AQ92830 837 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 GFM2Q969S9 779 aaKnown RBP17.06■□□□□ 0.32
CHTOP-202ENST00000368687 ZBTB9Q96C00 473 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 ITPAQ9BY32 194 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 C20orf27Q9GZN8 174 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 NXF5Q9H1B4 397 aaKnown RBP17.06■□□□□ 0.32
CHTOP-202ENST00000368687 GLIPR2Q9H4G4 154 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 MEAF6Q9HAF1 191 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 SH3BP4Q9P0V3 963 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 ATP6V1HQ9UI12 483 aa17.06■□□□□ 0.32
CHTOP-202ENST00000368687 BOKQ9UMX3 212 aaPredicted RBP17.06■□□□□ 0.32
CHTOP-202ENST00000368687 C19orf53Q9UNZ5 99 aaPredicted RBP17.06■□□□□ 0.32
CHTOP-202ENST00000368687 CHCHD2Q9Y6H1 151 aaPredicted RBP17.06■□□□□ 0.32
CHTOP-202ENST00000368687 AKAP10O43572 662 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 ZNF354AO60765 605 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-202ENST00000368687 AGFG2O95081 481 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 UNC5CO95185 931 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 GPC1P35052 558 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 FRKP42685 505 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-202ENST00000368687 MANFP55145 182 aaKnown RBP17.05■□□□□ 0.32
CHTOP-202ENST00000368687 PER3P56645 1201 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 PLGLB1Q02325 96 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 MLC1Q15049 377 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 EIF2S3LQ2VIR3 472 aaKnown RBP17.05■□□□□ 0.32
CHTOP-202ENST00000368687 TMEM81Q6P7N7 255 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 SLC34A3Q8N130 599 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 OR7G2Q8NG99 324 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 ARL8AQ96BM9 186 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 MAGED4Q96JG8 741 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 VSTM2LQ96N03 204 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 IL1RL2Q9HB29 575 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 BAIAP2L1Q9UHR4 511 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 SLC5A6Q9Y289 635 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 GPR55Q9Y2T6 319 aaPredicted RBP17.05■□□□□ 0.32
CHTOP-202ENST00000368687 DOPEY2Q9Y3R5 2298 aa17.05■□□□□ 0.32
CHTOP-202ENST00000368687 EML6Q6ZMW3 1958 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 A0A1B0GUH1 482 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 NPIPA5E9PKD4 350 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 HDAC3O15379 428 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 ASNA1O43681 348 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 ERN1O75460 977 aaKnown RBP17.04■□□□□ 0.32
CHTOP-202ENST00000368687 PPM1BO75688 479 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 SNX4O95219 450 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 LRATO95237 230 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 STSP08842 583 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 CCL3P10147 92 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 SOX18P35713 384 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 KRT20P35900 424 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 MC3RP41968 323 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 GPR85P60893 370 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 KCNJ2P63252 427 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 PLCXD2Q0VAA5 305 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 DUSP8Q13202 625 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 HYAL4Q2M3T9 481 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 VPS26BQ4G0F5 336 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 CPTPQ5TA50 214 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 TMEM107Q6UX40 140 aa17.04■□□□□ 0.32
CHTOP-202ENST00000368687 NUP54Q7Z3B4 507 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms