RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 RAE1P78406 368 aaKnown RBP16.25■□□□□ 0.19
HDDC3-201ENST00000330334 ACSM2AQ08AH3 577 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 DUSP8Q13202 625 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 CEBPEQ15744 281 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 TRMT12Q53H54 448 aaKnown RBP16.25■□□□□ 0.19
HDDC3-201ENST00000330334 NHSL2Q5HYW2 709 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 ACSM2BQ68CK6 577 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 DMRTC2Q8IXT2 367 aaPredicted RBP16.25■□□□□ 0.19
HDDC3-201ENST00000330334 LIX1Q8N485 282 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 OR10Q1Q8NGQ4 319 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 GSTO2Q9H4Y5 243 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 EHD3Q9NZN3 535 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 BCAP29Q9UHQ4 241 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 C15orf41Q9Y2V0 281 aa16.25■□□□□ 0.19
HDDC3-201ENST00000330334 A0A0G2JNJ9 132 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 NKX2-6A6NCS4 301 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 G3V2L1 256 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 PCDH7O60245 1069 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 GLRA3O75311 464 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 GDF1P27539 372 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 CCT5P48643 541 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 DUSP2Q05923 314 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 SF3B4Q15427 424 aaKnown RBP eCLIP16.24■□□□□ 0.191e-6■■□□□ 12.8
HDDC3-201ENST00000330334 BICRALQ6AI39 1079 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 TIGD3Q6B0B8 471 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 SLC30A6Q6NXT4 461 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 ZYG11AQ6WRX3 759 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 TDRPQ86YL5 185 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 ULK2Q8IYT8 1036 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 CLYBLQ8N0X4 340 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 ADCY4Q8NFM4 1077 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 OR52R1Q8NGF1 315 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.24■□□□□ 0.19
HDDC3-201ENST00000330334 HGDQ93099 445 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 APIPQ96GX9 242 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 GNRHR2Q96P88 292 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 ITPAQ9BY32 194 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 SLC6A15Q9H2J7 730 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 Q9UFV3 132 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 TBK1Q9UHD2 729 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 EMCNQ9ULC0 261 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 GPR55Q9Y2T6 319 aaPredicted RBP16.24■□□□□ 0.19
HDDC3-201ENST00000330334 WBP11Q9Y2W2 641 aaKnown RBP16.24■□□□□ 0.19
HDDC3-201ENST00000330334 PLLPQ9Y342 182 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 CCDC168Q8NDH2 2452 aa16.24■□□□□ 0.19
HDDC3-201ENST00000330334 GNG14A0A1W2PPG7 69 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 A0A1W2PPM1 405 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 FRG2CA6NGY1 282 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 FAM90A27PA6NNH2 459 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 LRATO95237 230 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 EPPINO95925 133 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 IL3P08700 152 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 MYL2P10916 166 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 PCSK2P16519 638 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 TIA1P31483 386 aaKnown RBP eCLIP16.23■□□□□ 0.19
HDDC3-201ENST00000330334 CRHR1P34998 444 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 ADH7P40394 386 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 MASP1P48740 699 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 HTR6P50406 440 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 DNAJB13P59910 316 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 TLE4Q04727 773 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 CRYZQ08257 329 aaKnown RBP16.23■□□□□ 0.19
HDDC3-201ENST00000330334 EXOSC7Q15024 291 aaKnown RBP16.23■□□□□ 0.19
HDDC3-201ENST00000330334 SLC25A35Q3KQZ1 300 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 CCDC153Q494R4 210 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 ZNF628Q5EBL2 1059 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 VASNQ6EMK4 673 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 TRIM46Q7Z4K8 759 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 PM20D2Q8IYS1 436 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 CCDC116Q8IYX3 515 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 C16orf78Q8WTQ4 265 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 BTBD9Q96Q07 612 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 TIMP4Q99727 224 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 SLC35C2Q9NQQ7 365 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 ALKBH4Q9NXW9 302 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 TAS2R7Q9NYW3 318 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 KCNN3Q9UGI6 736 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 GRID1Q9ULK0 1009 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 TIMM22Q9Y584 194 aa16.23■□□□□ 0.19
HDDC3-201ENST00000330334 INTS1Q8N201 2190 aaKnown RBP16.23■□□□□ 0.19
HDDC3-201ENST00000330334 OR6C70A6NIJ9 312 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 HSPB2A8KAH6 182 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 UBFD1O14562 309 aaKnown RBP16.22■□□□□ 0.19
HDDC3-201ENST00000330334 PLOD3O60568 738 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 ABCB7O75027 752 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 TRAPPC6AO75865 159 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 PROCP04070 461 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 PTPN6P29350 595 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 MPIP34949 423 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 TRPC1P48995 793 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 HMGCS1Q01581 520 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 LTB4RQ15722 352 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 HSPB2Q16082 182 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 FAM219BQ5XKK7 198 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 PRR22Q8IZ63 422 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 SIMC1Q8NDZ2 872 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 OR1J4Q8NGS1 313 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 FAM76AQ8TAV0 307 aa16.22■□□□□ 0.19
HDDC3-201ENST00000330334 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.22■□□□□ 0.19
HDDC3-201ENST00000330334 RDH11Q8TC12 318 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms