RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ACP1P24666 158 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 MAT2AP31153 395 aaKnown RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 CASP14P31944 242 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 TIMP3P35625 211 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 HSPA9P38646 679 aaKnown RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 RABIFP47224 123 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ACADVLP49748 655 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 NUMBP49757 651 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 DNA2P51530 1060 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ARSEP51690 589 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 LINC01547P58512 204 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 TPI1P60174 286 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 RHOAP61586 193 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 HNRNPKP61978 463 aaKnown RBP eCLIP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 POLR2LP62875 67 aaKnown RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 MC1RQ01726 317 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 SLC25A11Q02978 314 aaKnown RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 IL10RBQ08334 325 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ELP6Q0PNE2 266 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 GAGE2BQ13066 116 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 DPYSQ14117 519 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 KRT81Q14533 505 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 CYTH1Q15438 398 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 CA9Q16790 459 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 UGP2Q16851 508 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 TMEM52BQ4KMG9 183 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 GAGE2EQ4V326 116 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 SPECC1LQ69YQ0 1117 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ITPRIPL1Q6GPH6 555 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 GAGE2AQ6NT46 116 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 GCNT7Q6ZNI0 430 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 VSIG1Q86XK7 387 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 DNAAF5Q86Y56 855 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 GALNT13Q8IUC8 556 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 MCEMP1Q8IX19 187 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 SLC25A45Q8N413 288 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 CHCHD4Q8N4Q1 142 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 OR8K1Q8NGG5 319 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 OR4C6Q8NH72 309 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 NR4A3Q92570 626 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 CENPTQ96BT3 561 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF653Q96CK0 615 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ECHDC3Q96DC8 303 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 FAM120BQ96EK7 910 aaKnown RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 SAT2Q96F10 170 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 PSKH2Q96QS6 385 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 PEBP4Q96S96 227 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 DDOQ99489 341 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 TM6SF2Q9BZW4 377 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 TRIM7Q9C029 511 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 XPO4Q9C0E2 1151 aaKnown RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 SLC39A8Q9C0K1 460 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 SEMA6AQ9H2E6 1030 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 DHX35Q9H5Z1 703 aaKnown RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZDHHC6Q9H6R6 413 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZWILCHQ9H900 591 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 IFNKQ9P0W0 207 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 UVRAGQ9P2Y5 699 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 GAGE2DQ9UEU5 116 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 AMACRQ9UHK6 382 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 KLK13Q9UKR3 277 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 PPIL1Q9Y3C6 166 aa3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF106Q9H2Y7 1883 aaKnown RBP3.34□□□□□ -1.87
CKS1BP3-201ENST00000600888 AHCTF1Q8WYP5 2266 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 FREM2Q5SZK8 3169 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 A0A1W2PPI3 338 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 FAM170AA1A519 330 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 IGLON5A6NGN9 336 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 TMEM110-MUSTN1A8MSY1 372 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PSMD11O00231 422 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 TRAFD1O14545 582 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 FPGTO14772 594 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 RAD51BO15315 384 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 NDUFS4O43181 175 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 MITFO75030 526 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 SOCS5O75159 536 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PALMO75781 387 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PROSCO94903 275 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PLGP00747 810 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 CSF2P04141 144 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 LIPFP07098 398 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 GP1BAP07359 652 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PRSS1P07477 247 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 HOXC4P09017 264 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 H2AFZP0C0S5 128 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 ALPPL2P10696 532 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PAX1P15863 534 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 PRLRP16471 622 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 CKMT2P17540 419 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 IL4RP24394 825 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 NMBRP28336 390 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 TEAD1P28347 426 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 SERPINB6P35237 376 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 TRIM23P36406 574 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 MMP12P39900 470 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 RGRP47804 291 aa3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 DUSP3P51452 185 aaPredicted RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 CLNS1AP54105 237 aaKnown RBP3.33□□□□□ -1.88
CKS1BP3-201ENST00000600888 MFAP4P55083 255 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms