RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 HLA-DMAP28067 261 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 BSGP35613 385 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 MAGEA2P43356 314 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 MVDP53602 400 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 TFF2Q03403 129 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 PRDX1Q06830 199 aaKnown RBP16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 VEZF1Q14119 521 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 SMN1Q16637 294 aaKnown RBP16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 SLC5A12Q1EHB4 618 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 ENPP7Q6UWV6 458 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 GALNT5Q7Z7M9 940 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 SMRP1Q8NCR6 262 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 GOT1L1Q8NHS2 421 aaPredicted RBP16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 AASSQ9UDR5 926 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 KLK4Q9Y5K2 254 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 PPM1DO15297 605 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 FABP3P05413 133 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 HOXB3P14651 431 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 CD72P21854 359 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 AK4P27144 223 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 SLC9A3P48764 834 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 GZMKP49863 264 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 CRYBA2P53672 197 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 EFR3AQ14156 821 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 RPE65Q16518 533 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 TMEM92Q6UXU6 159 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 IKBIPQ70UQ0 350 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 CBLL1Q75N03 491 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 EIF3MQ7L2H7 374 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 KCTD20Q7Z5Y7 419 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 RNF130Q86XS8 419 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 PGBD3Q8N328 593 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 TTC29Q8NA56 475 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 C11orf65Q8NCR3 313 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 DEDD2Q8WXF8 326 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 MYDGFQ969H8 173 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 PITX2Q99697 317 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 BARD1Q99728 777 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 FBRSQ9HAH7 460 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 EIF3KQ9UBQ5 218 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 NUFIP1Q9UHK0 495 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 ICKQ9UPZ9 632 aa16.14■□□□□ 0.17
SHKBP1-205ENST00000594973 EML2O95834 649 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 OPN1SWP03999 348 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 ARHGDIAP52565 204 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 MLIPQ5VWP3 458 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 OR2T5Q6IEZ7 315 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 OR2T29Q8NH02 315 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 TM4SF18Q96CE8 201 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 MTERF3Q96E29 417 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 TRNT1Q96Q11 434 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 SLC22A4Q9H015 551 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 LHX9Q9NQ69 397 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 PLCXD1Q9NUJ7 323 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 TBC1D29Q9UFV1 150 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 KLHL20Q9Y2M5 609 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 NDUFS4O43181 175 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 WBP4O75554 376 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 NDUFV2P19404 249 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 DDCP20711 480 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 DAPP51397 102 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 OLR1P78380 273 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 KIAA1614Q5VZ46 1190 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 USP34Q70CQ2 3546 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 CEP68Q76N32 757 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 RDH10Q8IZV5 341 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 AMER3Q8N944 861 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 TMEM145Q8NBT3 493 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 OR2L8Q8NGY9 312 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 OR1E3Q8WZA6 343 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 TSACCQ96A04 125 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 OR2M4Q96R27 311 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 C17orf62Q9BQA9 187 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 COPS4Q9BT78 406 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 MRPS30Q9NP92 439 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 SPHK1Q9NYA1 384 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 SNX7Q9UNH6 387 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 POLHQ9Y253 713 aa16.13■□□□□ 0.17
SHKBP1-205ENST00000594973 HEATR5BQ9P2D3 2071 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 TRBV23OR9-2A0A075B6M9 112 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 CCDC182A6NF36 153 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 OR6C70A6NIJ9 312 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 PRR19A6NJB7 356 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 SUV39H1O43463 412 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 TMPRSS11DO60235 418 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 DRD1P21728 446 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 ENPP1P22413 925 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 UQCRC1P31930 480 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 TNFSF8P32971 234 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 PCGF2P35227 344 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 IL1RL1Q01638 556 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 TOR2AQ5JU69 321 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 VWA5B2Q8N398 1253 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 OR52N2Q8NGI0 321 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 CCL4L1Q8NHW4 92 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 SPATA9Q9BWV2 254 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 TEX10Q9NXF1 929 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 MAT2BQ9NZL9 334 aa16.12■□□□□ 0.17
SHKBP1-205ENST00000594973 TEKT2Q9UIF3 430 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms