RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TSNAXIP1Q2TAA8 658 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 DEPDC1Q5TB30 811 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 FNDC7Q5VTL7 733 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 LUZP2Q86TE4 346 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 OR4N5Q8IXE1 308 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 PPWD1Q96BP3 646 aaKnown RBP15.82■□□□□ 0.12
RETREG3-210ENST00000590541 GPR78Q96P69 363 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 PRM3Q9NNZ6 103 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 MS4A12Q9NXJ0 267 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 PSD3Q9NYI0 1048 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 EIF3LQ9Y262 564 aaKnown RBP15.82■□□□□ 0.12
RETREG3-210ENST00000590541 STAB1Q9NY15 2570 aa15.82■□□□□ 0.12
RETREG3-210ENST00000590541 ATRQ13535 2644 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 A0A087WUV0 522 aaPredicted RBP15.81■□□□□ 0.12
RETREG3-210ENST00000590541 H0YIV9 168 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 ARID1AO14497 2285 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 CASKO14936 926 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 SIAH2O43255 324 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 ERN1O75460 977 aaKnown RBP15.81■□□□□ 0.12
RETREG3-210ENST00000590541 COX7A2P14406 83 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 HIST1H1TP22492 207 aaPredicted RBP15.81■□□□□ 0.12
RETREG3-210ENST00000590541 ATP5A1P25705 553 aaKnown RBP15.81■□□□□ 0.12
RETREG3-210ENST00000590541 SOX18P35713 384 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 MAGEA12P43365 314 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 SLCO1A2P46721 670 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 ANK3Q12955 4377 aaKnown RBP15.81■□□□□ 0.12
RETREG3-210ENST00000590541 TBCELQ5QJ74 424 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 C10orf62Q5T681 223 aaPredicted RBP15.81■□□□□ 0.12
RETREG3-210ENST00000590541 LGSNQ5TDP6 509 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 KHDRBS2Q5VWX1 349 aaKnown RBP15.81■□□□□ 0.12
RETREG3-210ENST00000590541 BICRALQ6AI39 1079 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 ACOT4Q8N9L9 421 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 DOK4Q8TEW6 326 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 DIO2Q92813 273 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 RGMAQ96B86 450 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 FBXL20Q96IG2 436 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 GNRHR2Q96P88 292 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 DGAT2Q96PD7 388 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 GAL3ST4Q96RP7 486 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 PAFAH2Q99487 392 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 VPS11Q9H270 941 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 ACTR8Q9H981 624 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 NPFFR2Q9Y5X5 522 aa15.81■□□□□ 0.12
RETREG3-210ENST00000590541 RTCAO00442 366 aaKnown RBP15.8■□□□□ 0.12
RETREG3-210ENST00000590541 TGFB1P01137 390 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 PTX3P26022 381 aaPredicted RBP15.8■□□□□ 0.12
RETREG3-210ENST00000590541 ECHS1P30084 290 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 SSR2P43308 183 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 GTF2H2Q13888 395 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 EIPR1Q53HC9 387 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 TECRLQ5HYJ1 363 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 OR4C11Q6IEV9 310 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 GTF2H2CQ6P1K8 395 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 L3MBTL4Q8NA19 623 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 PPP1R14CQ8TAE6 165 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 ZPLD1Q8TCW7 415 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 PERPQ96FX8 193 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 SFXN3Q9BWM7 321 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 WWTR1Q9GZV5 400 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 IPPKQ9H8X2 491 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 C6orf203Q9P0P8 240 aaPredicted RBP15.8■□□□□ 0.12
RETREG3-210ENST00000590541 C15orf41Q9Y2V0 281 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 TESMINQ9Y4I5 508 aa15.8■□□□□ 0.12
RETREG3-210ENST00000590541 DEFB108AA8MXU0 73 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 STX16-NPEPL1H3BU86 382 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 STX16O14662 325 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 CRLF1O75462 422 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 ABHD2P08910 425 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 CPN2P22792 545 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 TLX1P31314 330 aaPredicted RBP15.79■□□□□ 0.12
RETREG3-210ENST00000590541 CPA2P48052 419 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 RAP1GDS1P52306 607 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 NAGLUP54802 743 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 EBPQ15125 230 aaKnown RBP15.79■□□□□ 0.12
RETREG3-210ENST00000590541 ACKR1Q16570 336 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 WIPI1Q5MNZ9 446 aaPredicted RBP15.79■□□□□ 0.12
RETREG3-210ENST00000590541 TMEM64Q6YI46 380 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 MYLK4Q86YV6 388 aaPredicted RBP15.79■□□□□ 0.12
RETREG3-210ENST00000590541 IFT20Q8IY31 132 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 ZCCHC7Q8N3Z6 543 aaKnown RBP15.79■□□□□ 0.12
RETREG3-210ENST00000590541 HUS1BQ8NHY5 278 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 ABTB1Q969K4 478 aaPredicted RBP15.79■□□□□ 0.12
RETREG3-210ENST00000590541 NTNG2Q96CW9 530 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 RBM18Q96H35 190 aaKnown RBP15.79■□□□□ 0.12
RETREG3-210ENST00000590541 ART5Q96L15 291 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 RILPQ96NA2 401 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 CCL19Q99731 98 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 RYDENQ9NUL5 291 aaKnown RBP15.79■□□□□ 0.12
RETREG3-210ENST00000590541 CPSF2Q9P2I0 782 aaKnown RBP15.79■□□□□ 0.12
RETREG3-210ENST00000590541 NDRG3Q9UGV2 375 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 PHF11Q9UIL8 331 aa15.79■□□□□ 0.12
RETREG3-210ENST00000590541 FOXE1O00358 373 aaPredicted RBP15.78■□□□□ 0.12
RETREG3-210ENST00000590541 DYRK3O43781 588 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 SMIM24O75264 130 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 CLDN9O95484 217 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 CLPSP04118 112 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 SNRPAP09012 282 aaKnown RBP15.78■□□□□ 0.12
RETREG3-210ENST00000590541 SLC37A1P57057 533 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 FBXW4P57775 412 aa15.78■□□□□ 0.12
RETREG3-210ENST00000590541 HERVK_113P63132 956 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms