RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ANKRA2Q9H9E1 313 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 EQTNQ9NQ60 294 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 MS4A12Q9NXJ0 267 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 TMCC3Q9ULS5 477 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 TDRD6O60522 2096 aaKnown RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 ZSCAN9O15535 394 aaPredicted RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 RGS10O43665 173 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 H1F0P07305 194 aaKnown RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 ALOX12P18054 663 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 ELAVL4P26378 380 aaKnown RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 TLX1P31314 330 aaPredicted RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 MAN2A2P49641 1150 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 BLKP51451 505 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 GP2P55259 537 aaKnown RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 C1orf61Q13536 156 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 GPAT3Q53EU6 434 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 FAM160A2Q8N612 972 aaPredicted RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 RHOXF1Q8NHV9 184 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 RLN3Q8WXF3 142 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 SLC6A18Q96N87 628 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 CSF3RQ99062 836 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 LMAN1LQ9HAT1 526 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 PRDM9Q9NQV7 894 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 WARS2Q9UGM6 360 aaKnown RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 KCNE3Q9Y6H6 103 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 TMEM265A0A087WTH1 108 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 A0A1W2PPW3 197 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 ZNF99A8MXY4 864 aaPredicted RBP17.04■□□□□ 0.32
SMPD3-211ENST00000568373 FAM227AF5H4B4 570 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 IDH2P48735 452 aaKnown RBP17.04■□□□□ 0.32
SMPD3-211ENST00000568373 XKP51811 444 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 HHEXQ03014 270 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 GAS6Q14393 721 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 DCST1Q5T197 706 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 KLHL17Q6TDP4 642 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 DEPDC4Q8N2C3 294 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 OR4K14Q8NGD5 310 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 GIMAP5Q96F15 307 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 NTMQ9P121 344 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 SLC9A8Q9Y2E8 581 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 HEMK1Q9Y5R4 338 aaPredicted RBP17.04■□□□□ 0.32
SMPD3-211ENST00000568373 SLC22A7Q9Y694 548 aa17.04■□□□□ 0.32
SMPD3-211ENST00000568373 TMX2-CTNND1H3BSU7 103 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 M0R3H8 397 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 FAAHO00519 579 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 DNAJB6O75190 326 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 ZNF217O75362 1048 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 OXSR1O95747 527 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 ADAP00813 363 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 MT-ND2P03891 347 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 EIF2S1P05198 315 aaKnown RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 CCNA2P20248 432 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 MAPK10P53779 464 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 SMIM11AP58511 58 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 SIM1P81133 766 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 SEC23BQ15437 767 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 PRSS48Q7RTY5 328 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 OOSP2Q86WS3 158 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 ZNF761Q86XN6 746 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 RBM12BQ8IXT5 1001 aaKnown RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 SVOPQ8N4V2 548 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 ZNF655Q8N720 491 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 FAM46DQ8NEK8 389 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 FAM174AQ8TBP5 190 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 RORBQ92753 470 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 ACTRT3Q9BYD9 372 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 TPSD1Q9BZJ3 242 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 LYRM4Q9HD34 91 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 A4GNTQ9UNA3 340 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 LIPT1Q9Y234 373 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 MRPS2Q9Y399 296 aaKnown RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 IGHV1OR15-9A0A0B4J2B8 117 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 OR5K3A6NET4 321 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 CASC3O15234 703 aaKnown RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 EPPINO95925 133 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 LGI1O95970 557 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 MASP1P48740 699 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 PPP1CAP62136 330 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 OLR1P78380 273 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 TEKQ02763 1124 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 PTGES3Q15185 160 aaKnown RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 MANEAQ5SRI9 462 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 MLIPQ5VWP3 458 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 FAM111BQ6SJ93 734 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 CCDC103Q8IW40 242 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 DEFB123Q8N688 67 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 OR7G2Q8NG99 324 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 ZDHHC1Q8WTX9 485 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 COL26A1Q96A83 441 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 FKBP10Q96AY3 582 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 GUCD1Q96NT3 240 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 SIGLEC11Q96RL6 698 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 GAS2L1Q99501 681 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 LRRC61Q9BV99 259 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 FUNDC2Q9BWH2 189 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 GPN2Q9H9Y4 310 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-211ENST00000568373 PLCXD1Q9NUJ7 323 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 TMEM74BQ9NUR3 256 aa17.03■□□□□ 0.32
SMPD3-211ENST00000568373 ZNF226Q9NYT6 803 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms