RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 CR2P20023 1033 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 FAUP35544 74 aaKnown RBP9.99□□□□□ -0.81
USB1-212ENST00000566082 PSPHP78330 225 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 HOXC5Q00444 222 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 ZMYND11Q15326 602 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 SF3A2Q15428 464 aaKnown RBP9.99□□□□□ -0.81
USB1-212ENST00000566082 CCSMST1Q4G0I0 132 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 TPGS2Q68CL5 300 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 NXPE4Q6UWF7 544 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 SYNPOQ8N3V7 929 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 GALNT6Q8NCL4 622 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 OR51A7Q8NH64 312 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 GNPDA2Q8TDQ7 276 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 DOK4Q8TEW6 326 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 CXorf40BQ96DE9 158 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 CD180Q99467 661 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 RBFOX1Q9NWB1 397 aaKnown RBP9.99□□□□□ -0.81
USB1-212ENST00000566082 ZNF226Q9NYT6 803 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 MAU2Q9Y6X3 613 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 PRODHO43272 600 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 UGDHO60701 494 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 MT-ND5P03915 603 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 PRNPP04156 253 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 ADH1AP07327 375 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 CD3GP09693 182 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 ACP5P13686 325 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 MNDAP41218 407 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 CTBP2P56545 445 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 SYPL1Q16563 259 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 PLBD1Q6P4A8 553 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 FAHD1Q6P587 224 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 RTL4Q6ZR62 310 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 OLIG3Q7RTU3 272 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 COMMD7Q86VX2 200 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 LILRA3Q8N6C8 439 aaPredicted RBP9.99□□□□□ -0.81
USB1-212ENST00000566082 ZNF740Q8NDX6 193 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 OR2T33Q8NG76 320 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 DNAJA4Q8WW22 397 aaPredicted RBP9.99□□□□□ -0.81
USB1-212ENST00000566082 TRIB2Q92519 343 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 CREB3L1Q96BA8 519 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 NUS1Q96E22 293 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 ARHGAP39Q9C0H5 1083 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 KATNBL1Q9H079 304 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 BRF2Q9HAW0 419 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 THSD1Q9NS62 852 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 PLCXD1Q9NUJ7 323 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 ASIC5Q9NY37 505 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 GABRQQ9UN88 632 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 MRPS23Q9Y3D9 190 aaKnown RBP9.99□□□□□ -0.81
USB1-212ENST00000566082 INSL5Q9Y5Q6 135 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 LRRN3E7EW58 273 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 POLR1CO15160 346 aaPredicted RBP9.99□□□□□ -0.81
USB1-212ENST00000566082 OR6A2O95222 327 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 NUDT14O95848 222 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 H2AFB2P0C5Z0 115 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 TYRP14679 529 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 GNSP15586 552 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 HOXA9P31269 272 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 CAP1Q01518 475 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 MBTPS1Q14703 1052 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 CALHM3Q86XJ0 350 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 HORMAD2Q8N7B1 307 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 TMEM145Q8NBT3 493 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 SRFBP1Q8NEF9 429 aaKnown RBP9.99□□□□□ -0.81
USB1-212ENST00000566082 OR6F1Q8NGZ6 308 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 RELTQ969Z4 430 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 THAP7Q9BT49 309 aaPredicted RBP9.99□□□□□ -0.81
USB1-212ENST00000566082 LRRN3Q9H3W5 708 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 EGLN3Q9H6Z9 239 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 PRKAG2Q9UGJ0 569 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 IL36AQ9UHA7 158 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 OR10H1Q9Y4A9 318 aa9.99□□□□□ -0.81
USB1-212ENST00000566082 SIPA1L1O43166 1804 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 LRRC72A6NJI9 287 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 C1QTNF3-AMACRE9PGA6 284 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 DSCR3O14972 297 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 NDUFS4O43181 175 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 RPP14O95059 124 aaKnown RBP9.98□□□□□ -0.81
USB1-212ENST00000566082 ARAFP10398 606 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 ARSBP15848 533 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 EVI2BP34910 448 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 GBX2P52951 348 aaPredicted RBP9.98□□□□□ -0.81
USB1-212ENST00000566082 RGS1Q08116 209 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 GBX1Q14549 363 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 GGTA1PQ4G0N0 100 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 GARNL3Q5VVW2 1013 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 ARMC6Q6NXE6 501 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 RFPL4BQ6ZWI9 263 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 CPOQ8IVL8 374 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 NATD1Q8N6N6 113 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 KCT2Q8NC54 265 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 OR52E4Q8NGH9 312 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 UBTD2Q8WUN7 234 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 ZNF514Q96K75 400 aaPredicted RBP9.98□□□□□ -0.81
USB1-212ENST00000566082 SLC22A12Q96S37 553 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 SAP130Q9H0E3 1048 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 XKR8Q9H6D3 395 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 DMRT3Q9NQL9 472 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 ITM2BQ9Y287 266 aa9.98□□□□□ -0.81
USB1-212ENST00000566082 WNT6Q9Y6F9 365 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms