RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 TMED5Q9Y3A6 229 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 CCL27Q9Y4X3 112 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 NEUROG3Q9Y4Z2 214 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 NOX1Q9Y5S8 564 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 TNFRSF18Q9Y5U5 241 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 COL27A1Q8IZC6 1860 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 DNAH14Q0VDD8 3507 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 CACNA1AO00555 2505 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 GOLGA4Q13439 2230 aaKnown RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 CEP295Q9C0D2 2601 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 A0A1B0GX78 115 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 CDHR4A6H8M9 788 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 MAGEB17A8MXT2 336 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 TMEM233B4DJY2 109 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 H0YIG0 161 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 DSCR3O14972 297 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 PIP5K1BO14986 540 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 P2RX6O15547 441 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 HCRTR1O43613 425 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 PRAMEF10O60809 474 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SCRG1O75711 98 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 RSL1D1O76021 490 aaKnown RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SCELO95171 688 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 GPANK1O95872 356 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 TBX6O95947 436 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 PDYNP01213 254 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 EIF2S1P05198 315 aaKnown RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 CD63P08962 238 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 HKR1P10072 659 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 TROVE2P10155 538 aaKnown RBP eCLIP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 ITGAMP11215 1152 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 PIM1P11309 404 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 CCL4P13236 92 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 ALOX12P18054 663 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 IL10P22301 178 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 LMO1P25800 156 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 RBMS1P29558 406 aaKnown RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 HNRNPH1P31943 449 aaKnown RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 GSTM5P46439 218 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 AVPR1BP47901 424 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 NEK2P51955 445 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SLC16A1P53985 500 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SEC24CP53992 1094 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 FOXA1P55317 472 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 CXADRP78310 365 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 FOXM1Q08050 763 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 DDX39BQ13838 428 aaKnown RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 HKDC1Q2TB90 917 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SGO1Q5FBB7 561 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 CLEC6AQ6EIG7 209 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 RHBDD2Q6NTF9 364 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 PWWP2BQ6NUJ5 590 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 TRIM40Q6P9F5 258 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 PAGE2Q7Z2X7 111 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 TMEM126BQ8IUX1 230 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 FAM9CQ8IZT9 166 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 ZCCHC7Q8N3Z6 543 aaKnown RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 C7orf57Q8NEG2 295 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 ADAMTS18Q8TE60 1221 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 TWIST2Q8WVJ9 160 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 NACC2Q96BF6 587 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 NXPE2Q96DL1 559 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 MS4A6EQ96DS6 147 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 C11orf24Q96F05 449 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 CHMP6Q96FZ7 201 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 PPP3R2Q96LZ3 170 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SLC46A1Q96NT5 459 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF317Q96PQ6 595 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 NPLQ9BXD5 320 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 ACPTQ9BZG2 426 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SHCBP1LQ9BZQ2 653 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SPRTNQ9H040 489 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 TUBB1Q9H4B7 451 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 DDX31Q9H8H2 851 aaKnown RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SYNPO2LQ9H987 977 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 ACTR5Q9H9F9 607 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 MEAF6Q9HAF1 191 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 ANKHQ9HCJ1 492 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SLCO1B3Q9NPD5 702 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 FARSBQ9NSD9 589 aaKnown RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 CUTCQ9NTM9 273 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 MRGBPQ9NV56 204 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 IRAK4Q9NWZ3 460 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 OCIAD1Q9NX40 245 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 PISDQ9UG56 409 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 SATB2Q9UPW6 733 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 TMEM184BQ9Y519 407 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-213ENST00000550629 TIMM22Q9Y584 194 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 USH1CQ9Y6N9 552 aa5.41□□□□□ -1.54
SCAF11-213ENST00000550629 ASXL3Q9C0F0 2248 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SPTBN4Q9H254 2564 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 A0A1W2PNU3 283 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 GMNCA6NCL1 334 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 SYNDIG1LA6NDD5 238 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 CDRT15L2A8MXV6 281 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ALG1L2C9J202 215 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF195O14628 629 aa5.4□□□□□ -1.54
SCAF11-213ENST00000550629 LSM1O15116 133 aaKnown RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 POLR3GO15318 223 aaPredicted RBP5.4□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF749O43361 778 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms