RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ATP6AP2O75787 350 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 SBK3P0C264 359 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 CPMP14384 443 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 PORP16435 677 aaPredicted RBP14.89□□□□□ -0.03
DDX55-212ENST00000544738 ACVR2AP27037 513 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 DEKP35659 375 aaKnown RBP14.89□□□□□ -0.03
DDX55-212ENST00000544738 KIR2DL3P43628 341 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 TMED10P49755 219 aaKnown RBP14.89□□□□□ -0.03
DDX55-212ENST00000544738 CDH13P55290 713 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 NRG3P56975 720 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 FUT7Q11130 342 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 NTRK2Q16620 822 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 SGO1Q5FBB7 561 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 TBCELQ5QJ74 424 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 COMMD6Q7Z4G1 85 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 DOK4Q8TEW6 326 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 UCN3Q969E3 161 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 SARAFQ96BY9 339 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 QPCTLQ9NXS2 382 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 PSME2Q9UL46 239 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 CHCHD2Q9Y6H1 151 aaPredicted RBP14.89□□□□□ -0.03
DDX55-212ENST00000544738 DNAJC13O75165 2243 aa14.89□□□□□ -0.03
DDX55-212ENST00000544738 ZNF407Q9C0G0 2248 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 EML6Q6ZMW3 1958 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 ANKRD33BA6NCL7 494 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 SUPT7LO94864 414 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 LY6G6DO95868 133 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 PDYNP01213 254 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 KRT6AP02538 564 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 CLPSP04118 112 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 KRT6BP04259 564 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 HSD3B1P14060 373 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 HSD3B2P26439 372 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 SSTR4P31391 388 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 HSD17B3P37058 310 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 KRT6CP48668 564 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 NR0B1P51843 470 aaKnown RBP14.88□□□□□ -0.03
DDX55-212ENST00000544738 TRA2BP62995 288 aaKnown RBP14.88□□□□□ -0.03
DDX55-212ENST00000544738 CLCQ05315 142 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 KEAP1Q14145 624 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 DEFB113Q30KQ7 82 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 WLSQ5T9L3 541 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 PRAMEF20Q5VT98 475 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 SLC48A1Q6P1K1 146 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 LETMD1Q6P1Q0 360 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 RPS27LQ71UM5 84 aaKnown RBP14.88□□□□□ -0.03
DDX55-212ENST00000544738 ZNF441Q8N8Z8 693 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 C17orf47Q8NEP4 570 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 OR7G1Q8NGA0 311 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 OR10G3Q8NGC4 313 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 DOHHQ9BU89 302 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 OR10A5Q9H207 317 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 EXO5Q9H790 373 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 FARSBQ9NSD9 589 aaKnown RBP14.88□□□□□ -0.03
DDX55-212ENST00000544738 PNPLA3Q9NST1 481 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 B4GALT7Q9UBV7 327 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 ACAD8Q9UKU7 415 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 STK38LQ9Y2H1 464 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 PCDHA9Q9Y5H5 950 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 NPFFR2Q9Y5X5 522 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 TLN2Q9Y4G6 2542 aa14.88□□□□□ -0.03
DDX55-212ENST00000544738 TRGV5A0A0B4J1U4 118 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 PPP6CO00743 305 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 RIPK2O43353 540 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 WDR1O75083 606 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 OR4F21O95013 312 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 NT5EP21589 574 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 GCAP28676 217 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 RPP38P78345 283 aaKnown RBP14.87□□□□□ -0.03
DDX55-212ENST00000544738 RASA2Q15283 850 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 RPS6KA2Q15349 733 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 ZNF678Q5SXM1 525 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 ZNF585AQ6P3V2 769 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 B3GNT6Q6ZMB0 384 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 SLC22A9Q8IVM8 553 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 LRRC25Q8N386 305 aaPredicted RBP14.87□□□□□ -0.03
DDX55-212ENST00000544738 ZNF615Q8N8J6 731 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 OR5M9Q8NGP3 310 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 ACMSDQ8TDX5 336 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 DIO2Q92813 273 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 SECISBP2Q96T21 854 aaKnown RBP14.87□□□□□ -0.03
DDX55-212ENST00000544738 FAIM2Q9BWQ8 316 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 ZNF703Q9H7S9 590 aaPredicted RBP14.87□□□□□ -0.03
DDX55-212ENST00000544738 ACKR4Q9NPB9 350 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 CRIM1Q9NZV1 1036 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 TMEM216Q9P0N5 145 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 VPS29Q9UBQ0 182 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 FETUBQ9UGM5 382 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 CES1P1Q9UKY3 287 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 CNOT11Q9UKZ1 510 aaKnown RBP14.87□□□□□ -0.03
DDX55-212ENST00000544738 CFL2Q9Y281 166 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 LIPGQ9Y5X9 500 aa14.87□□□□□ -0.03
DDX55-212ENST00000544738 A0A1W2PS29 197 aa14.86□□□□□ -0.03
DDX55-212ENST00000544738 CCDC151A5D8V7 595 aa14.86□□□□□ -0.03
DDX55-212ENST00000544738 FAM171A2A8MVW0 826 aa14.86□□□□□ -0.03
DDX55-212ENST00000544738 FAM47E-STBD1D6RA91 191 aa14.86□□□□□ -0.03
DDX55-212ENST00000544738 ULK1O75385 1050 aa14.86□□□□□ -0.03
DDX55-212ENST00000544738 ERAL1O75616 437 aaKnown RBP14.86□□□□□ -0.03
DDX55-212ENST00000544738 SNX4O95219 450 aa14.86□□□□□ -0.03
DDX55-212ENST00000544738 RAF1P04049 648 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms