RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 GABRPO00591 440 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 AKAP8O43823 692 aaKnown RBP16.78■□□□□ 0.28
NUP54-205ENST00000507257 C1GALT1C1LP0DN25 315 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 STOMP27105 288 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 AVPR1BP47901 424 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 BAMBIQ13145 260 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 SLBPQ14493 270 aaKnown RBP eCLIP16.78■□□□□ 0.28
NUP54-205ENST00000507257 MFSD13AQ14CX5 517 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 FCN2Q15485 313 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 MFSD14CQ5VZR4 134 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 HIST2H2AA3Q6FI13 130 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 LRRC28Q86X40 367 aaPredicted RBP16.78■□□□□ 0.28
NUP54-205ENST00000507257 OR52N1Q8NH53 320 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 C1QTNF7Q9BXJ2 289 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 RNF32Q9H0A6 362 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 MIEF1Q9NQG6 463 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 CYSLTR2Q9NS75 346 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 MALT1Q9UDY8 824 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 SRRDQ9UH36 339 aa16.78■□□□□ 0.28
NUP54-205ENST00000507257 MEN1O00255 615 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 BTN3A3O00478 584 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 OR7A10O76100 309 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 IL3P08700 152 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 ANXA3P12429 323 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 CTRB1P17538 263 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 SLC1A3P43003 542 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 RFX3P48380 749 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 CCSMST1Q4G0I0 132 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 ARHGAP15Q53QZ3 475 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 GPR139Q6DWJ6 353 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 CTRB2Q6GPI1 263 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 TYW3Q6IPR3 259 aaKnown RBP16.77■□□□□ 0.28
NUP54-205ENST00000507257 SDE2Q6IQ49 451 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 KIF18BQ86Y91 864 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 MARCH9Q86YJ5 346 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 MORN4Q8NDC4 146 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 OR4K5Q8NGD3 323 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 OR5M3Q8NGP4 307 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 ADAMTS19Q8TE59 1207 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 ZNF764Q96H86 408 aaPredicted RBP16.77■□□□□ 0.28
NUP54-205ENST00000507257 FOPNLQ96NB1 174 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 OR2M2Q96R28 347 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 C17orf62Q9BQA9 187 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 TMEM175Q9BSA9 504 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 WACQ9BTA9 647 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 SGPP1Q9BX95 441 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 RERGLQ9H628 205 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 MVB12BQ9H7P6 319 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 B4GALT6Q9UBX8 382 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 MOSPD1Q9UJG1 213 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 BACE2Q9Y5Z0 518 aa16.77■□□□□ 0.28
NUP54-205ENST00000507257 SMIM30A4D0T7 59 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 TUBAL3A6NHL2 446 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 EFCAB14O75071 495 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 EPHX1P07099 455 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 CHRM5P08912 532 aaPredicted RBP16.76■□□□□ 0.27
NUP54-205ENST00000507257 RAG2P55895 527 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 BDH1Q02338 343 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 TAP2Q03519 686 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 CNTN1Q12860 1018 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 LMAN2Q12907 356 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 SYTL3Q4VX76 610 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 KLHL12Q53G59 568 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 SLC27A4Q6P1M0 643 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 PRSS55Q6UWB4 352 aaPredicted RBP16.76■□□□□ 0.27
NUP54-205ENST00000507257 CDH24Q86UP0 819 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 TBC1D19Q8N5T2 526 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 UBE2E3Q969T4 207 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 RFT1Q96AA3 541 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 PPIL3Q9H2H8 161 aaKnown RBP16.76■□□□□ 0.27
NUP54-205ENST00000507257 CUEDC1Q9NWM3 386 aaPredicted RBP16.76■□□□□ 0.27
NUP54-205ENST00000507257 MGAT4AQ9UM21 535 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 CLCA2Q9UQC9 943 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 DYRK1BQ9Y463 629 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 A0A1B0GVI7 797 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 ADAM12O43184 909 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 HRO43593 1189 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 NFATC1O95644 943 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 GBAP04062 536 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 KLK1P06870 262 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 OR12D1P0DN82 309 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 CKBP12277 381 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 NPPBP16860 134 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 NAGAP17050 411 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 RBMS1P29558 406 aaKnown RBP16.76■□□□□ 0.27
NUP54-205ENST00000507257 TALDO1P37837 337 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 FRKP42685 505 aaPredicted RBP16.76■□□□□ 0.27
NUP54-205ENST00000507257 MTNR1BP49286 362 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 ACLYP53396 1101 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 CTBP2P56545 445 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 CYP4F8P98187 520 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 ZNF155Q12901 538 aaPredicted RBP16.76■□□□□ 0.27
NUP54-205ENST00000507257 GRK1Q15835 563 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 RBM45Q8IUH3 476 aaKnown RBP16.76■□□□□ 0.27
NUP54-205ENST00000507257 HS6ST3Q8IZP7 471 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 TRAM1L1Q8N609 369 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 RFKQ969G6 155 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 CASD1Q96PB1 797 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 SLC38A2Q96QD8 506 aa16.76■□□□□ 0.27
NUP54-205ENST00000507257 BTBD1Q9H0C5 482 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms