RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	ZFP3	Q96NJ6	502 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PPP1R2P1	Q96PQ5	205 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PANX2	Q96RD6	677 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NODAL	Q96S42	347 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	RHNO1	Q9BSD3	238 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SORBS1	Q9BX66	1292 aa	Known RBP	7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ERVK-6	Q9BXR3	956 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	WWTR1	Q9GZV5	400 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PCBD2	Q9H0N5	130 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	LPAR3	Q9UBY5	353 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	DAPP1	Q9UN19	280 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ERVK-19	Q9WJR5	959 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	B3GALT5	Q9Y2C3	310 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	VWF	P04275	2813 aa		7.75	□□□□□ -1.17
NIF3L1-206	ENST00000416651	KMT2C	Q8NEZ4	4911 aa	Known RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TCRBV7S3A2	A0A539	114 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	LRIT2	A6NDA9	550 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	EIF3F	O00303	357 aa	Predicted RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	HCRTR2	O43614	444 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PRAMEF4	O60810	478 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	RAMP1	O60894	148 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GUCA1C	O95843	209 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SERPINA6	P08185	405 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CTNNA1	P35221	906 aa	Known RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PTPN7	P35236	360 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SLC6A12	P48065	614 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SKP1	P63208	163 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	LOXL1	Q08397	574 aa	Predicted RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	FUT7	Q11130	342 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GAB1	Q13480	694 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CSHL1	Q14406	222 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	EBP	Q15125	230 aa	Known RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SF3B4	Q15427	424 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ETFDH	Q16134	617 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CTU2	Q2VPK5	515 aa	Known RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PRAMEF9	Q5VWM5	478 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	LIPN	Q5VXI9	398 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NXPE4	Q6UWF7	544 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	STAC2	Q6ZMT1	411 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CILP2	Q8IUL8	1156 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ZNF619	Q8N2I2	560 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	WDSUB1	Q8N9V3	476 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GAL3ST3	Q96A11	431 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MSI2	Q96DH6	328 aa	Known RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ZNF845	Q96IR2	970 aa	Predicted RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	F2RL3	Q96RI0	385 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CITED4	Q96RK1	184 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NDN	Q99608	321 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TRAF4	Q9BUZ4	470 aa	Predicted RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	FAM129A	Q9BZQ8	928 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CLK4	Q9HAZ1	481 aa	Known RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PRDM7	Q9NQW5	492 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MOCS1	Q9NZB8	636 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	CLEC4A	Q9UMR7	237 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PACSIN2	Q9UNF0	486 aa	Predicted RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	IKBKG	Q9Y6K9	419 aa		7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.74	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PCNX3	Q9H6A9	2034 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ANKRD33B	A6NCL7	494 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651		H3BMM5	538 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NDUFB5	O43674	189 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	B3GALT2	O43825	422 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	HAUS5	O94927	633 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ACTL6A	O96019	429 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	IFNB1	P01574	187 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	APRT	P07741	180 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ZNF708	P17019	499 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SERPINB3	P29508	390 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SUCLG1	P53597	346 aa	Known RBP	7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SLC37A1	P57057	533 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	GPS1	Q13098	491 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	KLF1	Q13351	362 aa	Predicted RBP	7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ZNF267	Q14586	743 aa	Predicted RBP	7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	BBS9	Q3SYG4	887 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	KBTBD12	Q3ZCT8	623 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	MRNIP	Q6NTE8	343 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ABHD17C	Q6PCB6	329 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PAQR3	Q6TCH7	311 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ENPP6	Q6UWR7	440 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	P4HA3	Q7Z4N8	544 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	UBQLNL	Q8IYU4	475 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	SLC15A4	Q8N697	577 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	TRPV3	Q8NET8	790 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	OR14L1P	Q8NHC6	308 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PEX13	Q92968	403 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	FBXW5	Q969U6	566 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	FAR2	Q96K12	515 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	HS6ST2	Q96MM7	605 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	KRT12	Q99456	494 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	DNAJC7	Q99615	494 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	HAUS8	Q9BT25	410 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	KIFC1	Q9BW19	673 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	NPL	Q9BXD5	320 aa	Predicted RBP	7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	KRTAP4-5	Q9BYR2	181 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	PARVB	Q9HBI1	364 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	ELOVL5	Q9NYP7	299 aa		7.73	□□□□□ -1.17
NIF3L1-206	ENST00000416651	WWOX	Q9NZC7	414 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms