RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 SPDL1Q96EA4 605 aa12.66□□□□□ -0.38
SNU13-204ENST00000402458 ITCHQ96J02 903 aa12.66□□□□□ -0.38
SNU13-204ENST00000402458 PANX1Q96RD7 426 aa12.66□□□□□ -0.38
SNU13-204ENST00000402458 GAL3ST4Q96RP7 486 aa12.66□□□□□ -0.38
SNU13-204ENST00000402458 EPS8L2Q9H6S3 715 aa12.66□□□□□ -0.38
SNU13-204ENST00000402458 C19orf53Q9UNZ5 99 aaPredicted RBP12.66□□□□□ -0.38
SNU13-204ENST00000402458 CAPN7Q9Y6W3 813 aa12.66□□□□□ -0.38
SNU13-204ENST00000402458 LOC400499M0QZD8 3231 aa12.66□□□□□ -0.38
SNU13-204ENST00000402458 DOCK10Q96BY6 2186 aa12.66□□□□□ -0.38
SNU13-204ENST00000402458 ZZEF1O43149 2961 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 C2orf92A0A1B0GVN3 265 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 NDUFAB1O14561 156 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 RFXANKO14593 260 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 CEACAM4O75871 244 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 DCTN3O75935 186 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 ANP32DO95626 131 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 CBX7O95931 251 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 SNRPB2P08579 225 aaKnown RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 S1PR1P21453 382 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 CCT3P49368 545 aaKnown RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 CDK9P50750 372 aaKnown RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 PRKAG1P54619 331 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 DCAF7P61962 342 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 HBA1P69905 142 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 KLF10Q13118 480 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 ZNHIT3Q15649 155 aaPredicted RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 H3F3CQ6NXT2 135 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 ISLR2Q6UXK2 745 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 TMEM64Q6YI46 380 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 MTDHQ86UE4 582 aaKnown RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 RPS19BP1Q86WX3 136 aaKnown RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 CLECL1Q8IZS7 167 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 LGI4Q8N135 537 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 OR2L13Q8N349 312 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 ANKS4BQ8N8V4 417 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 OR56A1Q8NGH5 318 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 C16orf52Q8NHV5 167 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 PSMA8Q8TAA3 256 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 NUBPLQ8TB37 319 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 SFXN5Q8TD22 340 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 THAP3Q8WTV1 239 aaPredicted RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 TSPEARQ8WU66 669 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 TM9SF4Q92544 642 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 VPS33AQ96AX1 596 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 CCDC115Q96NT0 180 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 NMUR2Q9GZQ4 415 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 WWTR1Q9GZV5 400 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 ADNPQ9H2P0 1102 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 CDCP1Q9H5V8 836 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 ZCCHC3Q9NUD5 404 aaKnown RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 ZNF223Q9UK11 482 aaPredicted RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 VPS4AQ9UN37 437 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 PCDHGB7Q9Y5F8 929 aa12.65□□□□□ -0.38
SNU13-204ENST00000402458 PCDHGA9Q9Y5G4 932 aaKnown RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 HEMK1Q9Y5R4 338 aaPredicted RBP12.65□□□□□ -0.38
SNU13-204ENST00000402458 UPK1AO00322 258 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 ANGPT2O15123 496 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 SCN2BO60939 215 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 SFTPCP11686 197 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 UQCRC2P22695 453 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 CHI3L1P36222 383 aaPredicted RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 CASRP41180 1078 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 ZFP36L2P47974 494 aaKnown RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 NRG3P56975 720 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 PHC1P78364 1004 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 ZNF155Q12901 538 aaPredicted RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 KCNAB2Q13303 367 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 UBAP2LQ14157 1087 aaKnown RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 EBPQ15125 230 aaKnown RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 VPS26BQ4G0F5 336 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 ACER2Q5QJU3 275 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 C6orf10Q5SRN2 563 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 FHL5Q5TD97 284 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 FCRLBQ6BAA4 426 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 TCTN3Q6NUS6 607 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 GK5Q6ZS86 529 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 ZNF621Q6ZSS3 439 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 FUNDC1Q8IVP5 155 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 C9orf40Q8IXQ3 194 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 TAGAPQ8N103 731 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 CCDC197Q8NCU1 140 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 BCAS4Q8TDM0 211 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 MS4A4EQ96PG1 132 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 LMF1Q96S06 567 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 ZNF552Q9H707 407 aaPredicted RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 CXorf36Q9H7Y0 433 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 ANKRA2Q9H9E1 313 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 SIRT3Q9NTG7 399 aaPredicted RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 RYDENQ9NUL5 291 aaKnown RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 STMN3Q9NZ72 180 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 MYOTQ9UBF9 498 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 TUBD1Q9UJT1 453 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 LEF1Q9UJU2 399 aaPredicted RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 YARS2Q9Y2Z4 477 aaKnown RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 ZNF451Q9Y4E5 1061 aa12.64□□□□□ -0.39
SNU13-204ENST00000402458 DSPP15924 2871 aaKnown RBP12.64□□□□□ -0.39
SNU13-204ENST00000402458 NUP214P35658 2090 aaPredicted RBP12.63□□□□□ -0.39
SNU13-204ENST00000402458 MGAQ8IWI9 3026 aa12.63□□□□□ -0.39
SNU13-204ENST00000402458 RNF103-CHMP3A0A140T963 221 aa12.63□□□□□ -0.39
SNU13-204ENST00000402458 A0A1W2PP18 115 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms