RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 LAMP5Q9UJQ1 280 aa16.37■□□□□ 0.21
GABRB3-202ENST00000311550 NUMBLQ9Y6R0 609 aa16.37■□□□□ 0.21
GABRB3-202ENST00000311550 A0A1W2PQL4 384 aaPredicted RBP16.37■□□□□ 0.21
GABRB3-202ENST00000311550 ZNF195O14628 629 aa16.37■□□□□ 0.21
GABRB3-202ENST00000311550 HNRNPA1P09651 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
GABRB3-202ENST00000311550 IL1RNP18510 177 aa16.37■□□□□ 0.21
GABRB3-202ENST00000311550 MMABQ96EY8 250 aaPredicted RBP16.37■□□□□ 0.21
GABRB3-202ENST00000311550 S100A16Q96FQ6 103 aaKnown RBP16.37■□□□□ 0.21
GABRB3-202ENST00000311550 MVB12BQ9H7P6 319 aa16.37■□□□□ 0.21
GABRB3-202ENST00000311550 LRRN3E7EW58 273 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 IFNA7P01567 189 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 CRYZQ08257 329 aaKnown RBP16.36■□□□□ 0.21
GABRB3-202ENST00000311550 EIF4HQ15056 248 aaKnown RBP16.36■□□□□ 0.21
GABRB3-202ENST00000311550 TMEM35AQ53FP2 167 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 LIPIQ6XZB0 460 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 HTR3DQ70Z44 454 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 SMARCD2Q92925 531 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 POLDIP3Q9BY77 421 aaKnown RBP16.36■□□□□ 0.21
GABRB3-202ENST00000311550 PRRG4Q9BZD6 226 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 LRRN3Q9H3W5 708 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 SEC61A2Q9H9S3 476 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 C5orf51A6NDU8 294 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 OR52A4PA6NMU1 304 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 NOTOA8MTQ0 251 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 KDM4BO94953 1096 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 CSTAP01040 98 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 C1SP09871 688 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 GNSP15586 552 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 TIMP2P16035 220 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 ZNF33BQ06732 778 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 SWI5Q1ZZU3 235 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 KLHL26Q53HC5 615 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 PARS2Q7L3T8 475 aaKnown RBP16.36■□□□□ 0.21
GABRB3-202ENST00000311550 EVPLQ92817 2033 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 OR14I1A6ND48 311 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 ADAMTS4O75173 837 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 ZNF432O94892 652 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 ITGAMP11215 1152 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 EPCAMP16422 314 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 NRG3P56975 720 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 HBA1P69905 142 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 LMX1AQ8TE12 382 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 NSMAFQ92636 917 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 PIGUQ9H490 435 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 MAU2Q9Y6X3 613 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 TUBGCP6Q96RT7 1819 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 C11orf98E9PRG8 122 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 PCDH17O14917 1159 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 HRH2P25021 359 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 PCSK6P29122 969 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 TMEM53Q6P2H8 277 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 TIGD4Q8IY51 512 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 ABCG5Q9H222 651 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 ACOT13Q9NPJ3 140 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 NLKQ9UBE8 527 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 MTHFD2P13995 350 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 PRAMEF17Q5VTA0 474 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 ALKBH2Q6NS38 261 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 SLC29A4Q7RTT9 530 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 WDR92Q96MX6 357 aa16.36■□□□□ 0.21
GABRB3-202ENST00000311550 C2orf74A8MZ97 194 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 ZNF20P17024 532 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 CERS1P27544 350 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 PAQR7Q86WK9 346 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 TMEM173Q86WV6 379 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-202ENST00000311550 AKAP1Q92667 903 aaKnown RBP eCLIP16.35■□□□□ 0.21
GABRB3-202ENST00000311550 BCL7BQ9BQE9 202 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 TNFRSF12AQ9NP84 129 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 TRIM3O75382 744 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-202ENST00000311550 UPK1BO75841 260 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 DDCP20711 480 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 AK4P27144 223 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-202ENST00000311550 PLAG1Q6DJT9 500 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 SLC9B2Q86UD5 537 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-202ENST00000311550 DNAJA4Q8WW22 397 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-202ENST00000311550 MYO10Q9HD67 2058 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 GON4LQ3T8J9 2241 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-202ENST00000311550 MMP2P08253 660 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 ATF4P18848 351 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-202ENST00000311550 HOXC5Q00444 222 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 SLC5A12Q1EHB4 618 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 A0A0X1KG70 313 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 SMIM18P0DKX4 95 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 ZNF81P51508 661 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 ARFRP1Q13795 201 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 HSD17B12Q53GQ0 312 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 DESI1Q6ICB0 168 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 ZNF227Q86WZ6 799 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 OR8S1Q8NH09 359 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 CPEB1Q9BZB8 566 aaKnown RBP16.35■□□□□ 0.21
GABRB3-202ENST00000311550 PRTFDC1Q9NRG1 225 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 PAPPAQ13219 1627 aa16.35■□□□□ 0.21
GABRB3-202ENST00000311550 CDK1P06493 297 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 ADH7P40394 386 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 MC3RP41968 323 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 ZNF101Q8IZC7 436 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 FAM86B1Q8N7N1 296 aa16.34■□□□□ 0.21
GABRB3-202ENST00000311550 ANKK1Q8NFD2 765 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms