RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 CSMD1Q96PZ7 3565 aa7□□□□□ -1.29
NPC1-208ENST00000590301 CPAMD8Q8IZJ3 1885 aa7□□□□□ -1.29
NPC1-208ENST00000590301 MDC1Q14676 2089 aaKnown RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 EXOC1LA0A1B0GW35 172 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ATP6AP2A0A1C7CYW4 349 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 C1orf226A1L170 272 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 CCDC151A5D8V7 595 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 A8MT66 165 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 POC1B-GALNT4F8VUJ3 575 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 C19orf84I3L1E1 186 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 HRKO00198 91 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 PGRMC2O15173 223 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ACOX3O15254 700 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ZNHIT1O43257 154 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ZNF354AO60765 605 aaPredicted RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 TRIM3O75382 744 aaPredicted RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 ATP6AP2O75787 350 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 KRT6AP02538 564 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 KRT6BP04259 564 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ATP1B1P05026 303 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 KLK1P06870 262 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 CPMP14384 443 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 CSNK2A2P19784 350 aaPredicted RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 MSX1P28360 303 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ECHS1P30084 290 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 DEKP35659 375 aaKnown RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 PIGAP37287 484 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 PEX19P40855 299 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 KRT6CP48668 564 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 XKP51811 444 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 DCAF7P61962 342 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 PMPCAQ10713 525 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 MAP4K2Q12851 820 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 CSTF3Q12996 717 aaKnown RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 RASA2Q15283 850 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 CDSNQ15517 529 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 SLC25A35Q3KQZ1 300 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 RIPPLY2Q5TAB7 128 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 TMEM198Q66K66 360 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ALKBH2Q6NS38 261 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 SLC48A1Q6P1K1 146 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ZNF585AQ6P3V2 769 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 DGAT2L6Q6ZPD8 337 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 NCCRP1Q6ZVX7 275 aaPredicted RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 SLC22A9Q8IVM8 553 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 IFT20Q8IY31 132 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 CLYBLQ8N0X4 340 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 VWA5B2Q8N398 1253 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 LIX1Q8N485 282 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 MARVELD2Q8N4S9 558 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 CEP112Q8N8E3 955 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 GBP7Q8N8V2 638 aaPredicted RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 OR4F6Q8NGB9 312 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 OR10G3Q8NGC4 313 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ACMSDQ8TDX5 336 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 SELENOMQ8WWX9 145 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ERP27Q96DN0 273 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 DTNBP1Q96EV8 351 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ZNF597Q96LX8 424 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 CDK15Q96Q40 435 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ZNF382Q96SR6 550 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 TTYH2Q9BSA4 534 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 DOHHQ9BU89 302 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 MRPL1Q9BYD6 325 aaKnown RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 EXO5Q9H790 373 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 MCCC2Q9HCC0 563 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ZBTB26Q9HCK0 441 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 SEMA4BQ9NPR2 832 aaPredicted RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 PNPLA3Q9NST1 481 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 ZNF358Q9NW07 568 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 TEX10Q9NXF1 929 aaPredicted RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 KCNN3Q9UGI6 736 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 CNOT11Q9UKZ1 510 aaKnown RBP6.99□□□□□ -1.29
NPC1-208ENST00000590301 SLC12A4Q9UP95 1085 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 RNF6Q9Y252 685 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 PCDHA9Q9Y5H5 950 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 HRH3Q9Y5N1 445 aa6.99□□□□□ -1.29
NPC1-208ENST00000590301 CROCCQ5TZA2 2017 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 LRRC3CA6NJW4 275 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 H3BQF6 201 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 PRKRAO75569 313 aaKnown RBP6.98□□□□□ -1.29
NPC1-208ENST00000590301 BCAS2O75934 225 aaPredicted RBP6.98□□□□□ -1.29
NPC1-208ENST00000590301 TOXO94900 526 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 GBAP04062 536 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 CLPSP04118 112 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 ENO1P06733 434 aaKnown RBP6.98□□□□□ -1.29
NPC1-208ENST00000590301 GSTA1P08263 222 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 SNRPB2P08579 225 aaKnown RBP6.98□□□□□ -1.29
NPC1-208ENST00000590301 GLI4P10075 376 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 KRT15P19012 456 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 NT5EP21589 574 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 ATP5F1P24539 256 aaPredicted RBP6.98□□□□□ -1.29
NPC1-208ENST00000590301 SSTR4P31391 388 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 GCKP35557 465 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 HSD17B3P37058 310 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 GSTM5P46439 218 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 ZFP36L2P47974 494 aaKnown RBP6.98□□□□□ -1.29
NPC1-208ENST00000590301 NR0B1P51843 470 aaKnown RBP6.98□□□□□ -1.29
NPC1-208ENST00000590301 PKNOX1P55347 436 aa6.98□□□□□ -1.29
NPC1-208ENST00000590301 NUP107P57740 925 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms