RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MC3RP41968 323 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 TMBIM6P55061 237 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 DEFB134Q4QY38 66 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 TAF8Q7Z7C8 310 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 PARP8Q8N3A8 854 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 APH1BQ8WW43 257 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 NMNAT1Q9HAN9 279 aaPredicted RBP17.08■□□□□ 0.32
SMPD3-211ENST00000568373 C3orf14Q9HBI5 128 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 EVA1BQ9NVM1 165 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 ERVK-18Q9QC07 812 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 RNF6Q9Y252 685 aa17.08■□□□□ 0.32
SMPD3-211ENST00000568373 LOC105369274A0A096LPK9 316 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 LOC102723532A0A0G2JNH3 316 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 A0A1W2PPC4 97 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 TRIM64BA6NI03 449 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 CHRM4P08173 479 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 LSSP48449 732 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 GSSP48637 474 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 EMX1Q04741 257 aaPredicted RBP17.07■□□□□ 0.32
SMPD3-211ENST00000568373 TDGQ13569 410 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 NPTX1Q15818 432 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 FRMPD2BQ6IN97 320 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 ZNF770Q6IQ21 691 aaPredicted RBP17.07■□□□□ 0.32
SMPD3-211ENST00000568373 OR4N4Q8N0Y3 316 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 AQP11Q8NBQ7 271 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 ZNF540Q8NDQ6 660 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 OR4D11Q8NGI4 311 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 VANGL1Q8TAA9 524 aaPredicted RBP17.07■□□□□ 0.32
SMPD3-211ENST00000568373 BAHD1Q8TBE0 780 aaPredicted RBP17.07■□□□□ 0.32
SMPD3-211ENST00000568373 C16orf58Q96GQ5 468 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 DHRS1Q96LJ7 313 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 SPATA5L1Q9BVQ7 753 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 CCNB1IP1Q9NPC3 277 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 TIMMDC1Q9NPL8 285 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 HRASLS2Q9NWW9 162 aa17.07■□□□□ 0.32
SMPD3-211ENST00000568373 CHURC1-FNTBB4DL54 471 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 B3GALT2O43825 422 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 FAM20BO75063 409 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 CTSEP14091 401 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 CPN2P22792 545 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 DEF8Q6ZN54 512 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 ABHD13Q7L211 337 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 RBM45Q8IUH3 476 aaKnown RBP17.06■□□□□ 0.32
SMPD3-211ENST00000568373 NUP43Q8NFH3 380 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 FAM81AQ8TBF8 368 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 GTPBP3Q969Y2 492 aaKnown RBP17.06■□□□□ 0.32
SMPD3-211ENST00000568373 RERGQ96A58 199 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-211ENST00000568373 BTBD2Q9BX70 525 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 DGCR6LQ9BY27 220 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 UBE2ZQ9H832 354 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-211ENST00000568373 ENOPH1Q9UHY7 261 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 TRBV4-1A0A0J9YWV2 114 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 MRPS14O60783 128 aaKnown RBP17.06■□□□□ 0.32
SMPD3-211ENST00000568373 POU2F1P14859 743 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 PVRP15151 417 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 ZNF10P21506 573 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-211ENST00000568373 CSNK2BP67870 215 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 LTB4RQ15722 352 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 PRAMEF8Q5VWM4 474 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 PRAMEF7Q5VXH5 474 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 OLIG3Q7RTU3 272 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 SAMD14Q8IZD0 417 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-211ENST00000568373 ZNF687Q8N1G0 1237 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 LRRC25Q8N386 305 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-211ENST00000568373 TSTD1Q8NFU3 115 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 FAR1Q8WVX9 515 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 OR7D2Q96RA2 312 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 WFDC6Q9BQY6 131 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 ORAI3Q9BRQ5 295 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 RHNO1Q9BSD3 238 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 DCUN1D5Q9BTE7 237 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 ACAD8Q9UKU7 415 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 DAPP1Q9UN19 280 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 PCDHGA10Q9Y5H3 936 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 SLCO1B1Q9Y6L6 691 aa17.06■□□□□ 0.32
SMPD3-211ENST00000568373 GON4LQ3T8J9 2241 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 A0A0G2JPF8 293 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 A0A0J9YY10 115 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 HNRNPCL2B2RXH8 293 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 HNRNPCL3B7ZW38 293 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 H0YGG7 62 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 ASNA1O43681 348 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 INMTO95050 263 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 GASTP01350 101 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 HNRNPCL4P0DMR1 293 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 ARF3P61204 181 aaPredicted RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 FOXD4Q12950 439 aaPredicted RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 RUNX2Q13950 521 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 FGD3Q5JSP0 725 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 RNF44Q7L0R7 432 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 COMTD1Q86VU5 262 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 PARGQ86W56 976 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 LACC1Q8IV20 430 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 P3H2Q8IVL5 708 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 RAB2BQ8WUD1 216 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 IPCEF1Q8WWN9 437 aaPredicted RBP17.05■□□□□ 0.32
SMPD3-211ENST00000568373 RSC1A1Q92681 617 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 KAT2AQ92830 837 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 KLHDC7BQ96G42 594 aa17.05■□□□□ 0.32
SMPD3-211ENST00000568373 CDX2Q99626 313 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms