RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 AGFG1P52594 562 aaKnown RBP10.52□□□□□ -0.73
RAB5C-203ENST00000546881 SLC37A1P57057 533 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 VSNL1P62760 191 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 FOXD4Q12950 439 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-203ENST00000546881 E2F2Q14209 437 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 RPS6KA2Q15349 733 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 NTRK2Q16620 822 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 CPSF6Q16630 551 aaKnown RBP eCLIP10.52□□□□□ -0.73
RAB5C-203ENST00000546881 SPRED3Q2MJR0 410 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 LGSNQ5TDP6 509 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 LACC1Q8IV20 430 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 PRR22Q8IZ63 422 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 FAM222BQ8WU58 562 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.52□□□□□ -0.73
RAB5C-203ENST00000546881 UCN3Q969E3 161 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 NXNL1Q96CM4 212 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 RILPQ96NA2 401 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 TRIB1Q96RU8 372 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 ATOH8Q96SQ7 321 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 TIMP4Q99727 224 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 SH3GL2Q99962 352 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 EPB41L4BQ9H329 900 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 IGSF5Q9NSI5 407 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 TEX10Q9NXF1 929 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-203ENST00000546881 CBLCQ9ULV8 474 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 SLC6A5Q9Y345 797 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 PCDHGB3Q9Y5G1 929 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 PCDHGA11Q9Y5H2 935 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 ITPR3Q14573 2671 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 ARHGAP21Q5T5U3 1957 aa10.52□□□□□ -0.73
RAB5C-203ENST00000546881 PRRC2AP48634 2157 aaKnown RBP10.51□□□□□ -0.73
RAB5C-203ENST00000546881 A0A1W2PS29 197 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 FAM221AA4D161 298 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 TUBAL3A6NHL2 446 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 LRRC14BA6NHZ5 514 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 SYCE1LA8MT33 242 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 AHRRA9YTQ3 701 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 EEF1E1-BLOC1S5C9J1V9 151 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 EEF1E1O43324 174 aaKnown RBP10.51□□□□□ -0.73
RAB5C-203ENST00000546881 TMPRSS11DO60235 418 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 TRIM3O75382 744 aaPredicted RBP10.51□□□□□ -0.73
RAB5C-203ENST00000546881 AIFM1O95831 613 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 CLPSP04118 112 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 KRT15P19012 456 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 TYK2P29597 1187 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 PIK3CGP48736 1102 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 NEK2P51955 445 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 NRG3P56975 720 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 IRF9Q00978 393 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 CRYZQ08257 329 aaKnown RBP10.51□□□□□ -0.73
RAB5C-203ENST00000546881 PFKFB4Q16877 469 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 ERCC6LQ2NKX8 1250 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 TBCELQ5QJ74 424 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 C6orf163Q5TEZ5 329 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 LIPJQ5W064 366 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 PACS2Q86VP3 889 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 NUDT13Q86X67 352 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 PM20D2Q8IYS1 436 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 KCTD4Q8WVF5 259 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 SLC44A1Q8WWI5 657 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 REPS1Q96D71 796 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 HSPBAP1Q96EW2 488 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 GNRHR2Q96P88 292 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 VPS11Q9H270 941 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 GSX1Q9H4S2 264 aaPredicted RBP10.51□□□□□ -0.73
RAB5C-203ENST00000546881 SNX15Q9NRS6 342 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 ACOT9Q9Y305 439 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 ASB4Q9Y574 426 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 NPFFR2Q9Y5X5 522 aa10.51□□□□□ -0.73
RAB5C-203ENST00000546881 A0A087X1B8 175 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 A0A0A6YYD5 115 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 SMIM23A6NLE4 172 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 GNB5O14775 395 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 PGRMC2O15173 223 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 SLC35E2P0CK97 266 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 DRD2P14416 443 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 HOXB4P17483 251 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-203ENST00000546881 NT5EP21589 574 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 CNTFP26441 200 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 PIK3R1P27986 724 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 CEACAM8P31997 349 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-203ENST00000546881 BSGP35613 385 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 TMED10P49755 219 aaKnown RBP10.5□□□□□ -0.73
RAB5C-203ENST00000546881 CDK9P50750 372 aaKnown RBP10.5□□□□□ -0.73
RAB5C-203ENST00000546881 ZNF136P52737 540 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 RPP38P78345 283 aaKnown RBP10.5□□□□□ -0.73
RAB5C-203ENST00000546881 GTF2H2Q13888 395 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 KEAP1Q14145 624 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 SLC29A2Q14542 456 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 SETDB1Q15047 1291 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 SF3B4Q15427 424 aaKnown RBP eCLIP10.5□□□□□ -0.73
RAB5C-203ENST00000546881 NNATQ16517 81 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 EIPR1Q53HC9 387 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 WIPI1Q5MNZ9 446 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-203ENST00000546881 OR52E8Q6IFG1 317 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 MRM1Q6IN84 353 aaKnown RBP10.5□□□□□ -0.73
RAB5C-203ENST00000546881 GTF2H2CQ6P1K8 395 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 KLC3Q6P597 504 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 PAMR1Q6UXH9 720 aa10.5□□□□□ -0.73
RAB5C-203ENST00000546881 GALNT12Q8IXK2 581 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms