RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 NPFFR2Q9Y5X5 522 aa19.32■□□□□ 0.68
VSX1-206ENST00000444511 DNAJC13O75165 2243 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 TACC2O95359 2948 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 TRIM49D1C9J1S8 452 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 TRIM3O75382 744 aaPredicted RBP19.31■□□□□ 0.68
VSX1-206ENST00000444511 OTCP00480 354 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 CPMP14384 443 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 PORP16435 677 aaPredicted RBP19.31■□□□□ 0.68
VSX1-206ENST00000444511 ADH7P40394 386 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 MYBPHQ13203 477 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 COMMD6Q7Z4G1 85 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 METTL4Q8N3J2 472 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 ZNF615Q8N8J6 731 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 MYRIPQ8NFW9 859 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 UHMK1Q8TAS1 419 aaKnown RBP19.31■□□□□ 0.68
VSX1-206ENST00000444511 ZNF180Q9UJW8 692 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 PCDHGB3Q9Y5G1 929 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 EML6Q6ZMW3 1958 aa19.31■□□□□ 0.68
VSX1-206ENST00000444511 PHF3Q92576 2039 aaKnown RBP19.3■□□□□ 0.68
VSX1-206ENST00000444511 C15orf38-AP3S2A0A0A6YYH1 394 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 GOLGA6L10A6NI86 522 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 SNX4O95219 450 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 RPS17P08708 135 aaKnown RBP19.3■□□□□ 0.68
VSX1-206ENST00000444511 DEKP35659 375 aaKnown RBP19.3■□□□□ 0.68
VSX1-206ENST00000444511 MASP1P48740 699 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 RPP38P78345 283 aaKnown RBP19.3■□□□□ 0.68
VSX1-206ENST00000444511 SLC25A35Q3KQZ1 300 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 RIPPLY2Q5TAB7 128 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 CES4AQ5XG92 561 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 RPS27LQ71UM5 84 aaKnown RBP19.3■□□□□ 0.68
VSX1-206ENST00000444511 WDR53Q7Z5U6 358 aaPredicted RBP19.3■□□□□ 0.68
VSX1-206ENST00000444511 TMEM200AQ86VY9 491 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 LIX1LQ8IVB5 337 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 ULK2Q8IYT8 1036 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 NOA1Q8NC60 698 aaKnown RBP19.3■□□□□ 0.68
VSX1-206ENST00000444511 OR7G1Q8NGA0 311 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 SPPL2AQ8TCT8 520 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 TRPC4APQ8TEL6 797 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 DCAKDQ8WVC6 231 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 SELENOMQ8WWX9 145 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 ZNF592Q92610 1267 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 RILPQ96NA2 401 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 SECISBP2Q96T21 854 aaKnown RBP19.3■□□□□ 0.68
VSX1-206ENST00000444511 FARSBQ9NSD9 589 aaKnown RBP19.3■□□□□ 0.68
VSX1-206ENST00000444511 SNX6Q9UNH7 406 aa19.3■□□□□ 0.68
VSX1-206ENST00000444511 A0A087WUV0 522 aaPredicted RBP19.29■□□□□ 0.68
VSX1-206ENST00000444511 C1orf226A1L170 272 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 TRAPPC6AO75865 159 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 KRT15P19012 456 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 TSPAN8P19075 237 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 CDH13P55290 713 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 DUSP8Q13202 625 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 BICRALQ6AI39 1079 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 SLC48A1Q6P1K1 146 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 PACS2Q86VP3 889 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 PRR22Q8IZ63 422 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 VWA5B2Q8N398 1253 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 MNS1Q8NEH6 495 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 C17orf47Q8NEP4 570 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 ZNF483Q8TF39 744 aaPredicted RBP19.29■□□□□ 0.68
VSX1-206ENST00000444511 ADIPOR1Q96A54 375 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 ANGPTL4Q9BY76 406 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 BRINP2Q9C0B6 783 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 NMRK1Q9NWW6 199 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 PCDHA9Q9Y5H5 950 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 TEP1Q99973 2627 aaKnown RBP19.29■□□□□ 0.68
VSX1-206ENST00000444511 CCDC168Q8NDH2 2452 aa19.29■□□□□ 0.68
VSX1-206ENST00000444511 A0A1B0GTL3 188 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 A8MT66 165 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 PPP6CO00743 305 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 ERAL1O75616 437 aaKnown RBP19.28■□□□□ 0.68
VSX1-206ENST00000444511 PDYNP01213 254 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 TEX35Q5T0J7 233 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 LETMD1Q6P1Q0 360 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 BRF2Q9HAW0 419 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 BCAP29Q9UHQ4 241 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 CES1P1Q9UKY3 287 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 PSME2Q9UL46 239 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 CFL2Q9Y281 166 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 HCFC1P51610 2035 aa19.28■□□□□ 0.68
VSX1-206ENST00000444511 HSPB2A8KAH6 182 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 ZWINTO95229 277 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 SNRPAP09012 282 aaKnown RBP19.27■□□□□ 0.68
VSX1-206ENST00000444511 CSNK2A2P19784 350 aaPredicted RBP19.27■□□□□ 0.68
VSX1-206ENST00000444511 GPX3P22352 226 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 ABCD3P28288 659 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 ECHS1P30084 290 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 FEN1P39748 380 aaKnown RBP19.27■□□□□ 0.68
VSX1-206ENST00000444511 CASP3P42574 277 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 GALNT1Q10472 559 aaPredicted RBP19.27■□□□□ 0.68
VSX1-206ENST00000444511 TOMM20Q15388 145 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 HSPB2Q16082 182 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 LGSNQ5TDP6 509 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 KLHL29Q96CT2 875 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 C1QTNF3Q9BXJ4 246 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 NXF5Q9H1B4 397 aaKnown RBP19.27■□□□□ 0.68
VSX1-206ENST00000444511 TRPS1Q9UHF7 1281 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 C15orf41Q9Y2V0 281 aa19.27■□□□□ 0.68
VSX1-206ENST00000444511 EXOC1LA0A1B0GW35 172 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 AHRRA9YTQ3 701 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms