RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 IL9P15248 144 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 GM2AP17900 193 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 NCF2P19878 526 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CALB2P22676 271 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 MAT2AP31153 395 aaKnown RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 TNFSF8P32971 234 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 DRD3P35462 400 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 BDKRB1P46663 353 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 RGS19P49795 217 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCNG1P51959 295 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CTSCP53634 463 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CDH13P55290 713 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 PKNOX1P55347 436 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 AP1S2P56377 157 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 NCALDP61601 193 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CDK3Q00526 305 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CDKL1Q00532 357 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 BTKQ06187 659 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ACTN3Q08043 901 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM115Q12893 351 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 BNIP1Q12981 228 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CDC16Q13042 620 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 TSTA3Q13630 321 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 GTF2H2Q13888 395 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 RPS6KA2Q15349 733 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 MAPRE2Q15555 327 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 KIF19Q2TAC6 998 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC9B1Q4ZJI4 515 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 LACTB2Q53H82 288 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 FBXO48Q5FWF7 155 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 DCAF12L2Q5VW00 463 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CLEC6AQ6EIG7 209 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 GTF2H2CQ6P1K8 395 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 AAGABQ6PD74 315 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 TTC23LQ6PF05 361 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM220Q6QAJ8 160 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 RPS27LQ71UM5 84 aaKnown RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 GOLGA7Q7Z5G4 137 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ADGRG6Q86SQ4 1221 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 LRRTM4Q86VH4 590 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 MYLK4Q86YV6 388 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CLYBLQ8N0X4 340 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 LSMEM2Q8N112 164 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ARHGAP24Q8N264 748 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 RAB42Q8N4Z0 105 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 TEX9Q8N6V9 391 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR6Y1Q8NGX8 325 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CFAP61Q8NHU2 1237 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 FAM110DQ8TAY7 271 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 HM13Q8TCT9 377 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 MAGEC3Q8TD91 643 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 MCOLN3Q8TDD5 553 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 AGAP11Q8TF27 550 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 UBTD2Q8WUN7 234 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 TWIST2Q8WVJ9 160 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATL1Q8WXF7 558 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 KLK6Q92876 244 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ESAMQ96AP7 390 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 MCUR1Q96AQ8 359 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 MOCOSQ96EN8 888 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 C19orf60Q96EN9 201 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 URB1-AS1Q96HZ7 61 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 CATSPER2Q96P56 530 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZNF382Q96SR6 550 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 WDR77Q9BQA1 342 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 HGH1Q9BTY7 390 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 NUSAP1Q9BXS6 441 aaKnown RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 B3GNT4Q9C0J1 378 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 NMUR2Q9GZQ4 415 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR2AG1Q9H205 316 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 OSGEPL1Q9H4B0 414 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 EPHX3Q9H6B9 360 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 KCNK13Q9HB14 408 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 RDH14Q9HBH5 336 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 FBRSL1Q9HCM7 1045 aaKnown RBP3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 PREBQ9HCU5 417 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 OBP2BQ9NPH6 170 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 SAR1AQ9NR31 198 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ARMCX1Q9P291 453 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATXN10Q9UBB4 475 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZDHHC2Q9UIJ5 367 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 HAO1Q9UJM8 370 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 PCTPQ9UKL6 214 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 IKZF3Q9UKT9 509 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 MMP17Q9ULZ9 603 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 DUSP12Q9UNI6 340 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 BTRCQ9Y297 605 aa3.62□□□□□ -1.83
HMGB3P20-201ENST00000417997 ANKRD12Q6UB98 2062 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATG2BQ96BY7 2078 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 CEP350Q5VT06 3117 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 EME2A4GXA9 379 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 LRRC72A6NJI9 287 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 SAC3D1A6NKF1 404 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 MEI4A8MW99 385 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 GPR89AB7ZAQ6 455 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 STMND1H3BQB6 276 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 IFRD1O00458 451 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 E2F3O00716 465 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 FPGTO14772 594 aa3.61□□□□□ -1.83
HMGB3P20-201ENST00000417997 CLGNO14967 610 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms