RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SPRR3Q9UBC9 169 aa16.37■□□□□ 0.21
SHKBP1-227ENST00000602011 ST6GALNAC2Q9UJ37 374 aa16.37■□□□□ 0.21
SHKBP1-227ENST00000602011 CNOT11Q9UKZ1 510 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-227ENST00000602011 ERVK-19Q9WJR5 959 aa16.37■□□□□ 0.21
SHKBP1-227ENST00000602011 UTP11Q9Y3A2 253 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-227ENST00000602011 LRRC3CA6NJW4 275 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 UBXN8O00124 270 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 SEMA3DO95025 777 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 RFPL3SP0C7P2 107 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 NR2F6P10588 404 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 MTHFD2P13995 350 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 NAGAP17050 411 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 ENDOUP21128 410 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 DNASE1P24855 282 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 PPP2R2AP63151 447 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 DDX39BQ13838 428 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 SLMAPQ14BN4 828 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 SETDB1Q15047 1291 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 RPS6KA2Q15349 733 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 PCBP2Q15366 365 aaKnown RBP eCLIP16.36■□□□□ 0.216e-9■■■■■ 40.7
SHKBP1-227ENST00000602011 KBTBD12Q3ZCT8 623 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 NHSL2Q5HYW2 709 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 PRAMEF20Q5VT98 475 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 KLC3Q6P597 504 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 NUDT13Q86X67 352 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 MYLK4Q86YV6 388 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 TGIF2LYQ8IUE0 185 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 ZZZ3Q8IYH5 903 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 MMP21Q8N119 569 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 L3MBTL4Q8NA19 623 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 OR7G1Q8NGA0 311 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 DIO2Q92813 273 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 HSPBAP1Q96EW2 488 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 RMND5BQ96G75 393 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 JSRP1Q96MG2 331 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 GAL3ST4Q96RP7 486 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 MTERF1Q99551 399 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 SERPINI1Q99574 410 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 ANGPTL4Q9BY76 406 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 CLEC4MQ9H2X3 399 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 CCM2LQ9NUG4 571 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 FETUBQ9UGM5 382 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 CFL2Q9Y281 166 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 NPFFR2Q9Y5X5 522 aa16.36■□□□□ 0.21
SHKBP1-227ENST00000602011 A0A0A6YYD5 115 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 GUCY1B2O75343 617 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 SH3BGRLO75368 114 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 HPNP05981 417 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 GFAPP14136 432 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 FOSL1P15407 271 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 GDF1P27539 372 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 PIK3R1P27986 724 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 UQCRC1P31930 480 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 BSGP35613 385 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 HNRNPH2P55795 449 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 GPX6P59796 221 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 RPS13P62277 151 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 DUSP8Q13202 625 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 FLYWCH1Q4VC44 716 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 C6orf163Q5TEZ5 329 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 OR52E8Q6IFG1 317 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 DGAT2L6Q6ZPD8 337 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 ZNF441Q8N8Z8 693 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 SPATA4Q8NEY3 305 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 MBD6Q96DN6 1003 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 TIMP4Q99727 224 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 PRDM14Q9GZV8 571 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 RAB17Q9H0T7 212 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 DPH5Q9H2P9 285 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 CXorf21Q9HAI6 301 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 ADAM29Q9UKF5 820 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 TMCO1Q9UM00 188 aa16.35■□□□□ 0.21
SHKBP1-227ENST00000602011 C15orf38-AP3S2A0A0A6YYH1 394 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 A0A1W2PR48 441 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 CD8B2A6NJW9 211 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 HRKO00198 91 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 FAM155BO75949 473 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 IL18BPO95998 194 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 GCKP35557 465 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 MAGEA4P43358 317 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 CDK9P50750 372 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 EEF1A1P68104 462 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 FUT7Q11130 342 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 DLG1Q12959 904 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 ACSF3Q4G176 576 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 EEF1A1P5Q5VTE0 462 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 NSUN5P2Q63ZY6 315 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 VASNQ6EMK4 673 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 SCIMPQ6UWF3 145 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 PAGE2Q7Z2X7 111 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 GALNT12Q8IXK2 581 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 OR4K14Q8NGD5 310 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 SPPL2AQ8TCT8 520 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 TRPC4APQ8TEL6 797 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 NXNL1Q96CM4 212 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 DTNBP1Q96EV8 351 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 ALPK1Q96QP1 1244 aa16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 SORBS1Q9BX66 1292 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 ZNF717Q9BY31 904 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-227ENST00000602011 GSX1Q9H4S2 264 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 898 ms