RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SERPINA11Q86U17 422 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 ST13P4Q8IZP2 240 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 OR56A1Q8NGH5 318 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 OR5AK3PQ8NH89 298 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 CTHRC1Q96CG8 243 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 CCDC124Q96CT7 223 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 RNF31Q96EP0 1072 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 TAAR9Q96RI9 348 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 KCTD14Q9BQ13 255 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 ECSITQ9BQ95 431 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 ZPBPQ9BS86 351 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 DDA1Q9BW61 102 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 SPATA9Q9BWV2 254 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 SLC7A5P2Q9GIP4 190 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 SLC26A1Q9H2B4 701 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 RAD21L1Q9H4I0 556 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 NECTIN3Q9NQS3 549 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 PCDHGA3Q9Y5H0 932 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 SNX8Q9Y5X2 465 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 B3GALT1Q9Y5Z6 326 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 NINQ8N4C6 2090 aa13.81□□□□□ -0.2
SHKBP1-211ENST00000595945 A0A087WV62 115 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 OR2W5A6NFC9 320 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 VSTM2BA6NLU5 285 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 MEN1O00255 615 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 PLOD3O60568 738 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 CNOT3O75175 753 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 TNFRSF21O75509 655 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 CDC123O75794 336 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 BCAS2O75934 225 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 ALBP02768 609 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 CEACAM1P13688 526 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 TCN1P20061 433 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 MAOAP21397 527 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 MC3RP41968 323 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 MAGEA8P43361 318 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 STT3AP46977 705 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 FADDQ13158 208 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 SLC13A2Q13183 592 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 SERTAD2Q14140 314 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 KPNB1Q14974 876 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 ADRM1Q16186 407 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 PRICKLE4Q2TBC4 344 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 VWA2Q5GFL6 755 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 COX20Q5RI15 118 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 DCAF12Q5T6F0 453 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 C1orf146Q5VVC0 180 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 LCN10Q6JVE6 187 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 FAM111BQ6SJ93 734 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 TMEM107Q6UX40 140 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 ZNF517Q6ZMY9 492 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 DGAT2L6Q6ZPD8 337 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 C6orf120Q7Z4R8 191 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 ZZZ3Q8IYH5 903 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 OR2L13Q8N349 312 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 PLPP5Q8NEB5 264 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 C7orf57Q8NEG2 295 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 ADCY4Q8NFM4 1077 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 OR7G2Q8NG99 324 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 WDR36Q8NI36 951 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 KAT2AQ92830 837 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 FKBP10Q96AY3 582 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 YIPF2Q9BWQ6 316 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 TMEM121BQ9BXQ6 578 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 ALOXE3Q9BYJ1 711 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 SPRY4Q9C004 299 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 MUC13Q9H3R2 512 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 SERHL2Q9H4I8 314 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 C14orf105Q9NVL8 296 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 MAT2BQ9NZL9 334 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 PTGFRNQ9P2B2 879 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 CTSFQ9UBX1 484 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 PISDQ9UG56 409 aa13.8□□□□□ -0.2
SHKBP1-211ENST00000595945 PIEZO1Q92508 2521 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 UPK1AO00322 258 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 PLD2O14939 933 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 KCNK5O95279 499 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 PSMG1O95456 288 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 DLGAP3O95886 979 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 CT62P0C5K7 136 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 S1PR1P21453 382 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 CHI3L1P36222 383 aaPredicted RBP13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 MAPK10P53779 464 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 ACTR3P61158 418 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 STX4Q12846 297 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 MAP4K2Q12851 820 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 SPDYE7PQ495Y7 208 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 EXOSC6Q5RKV6 272 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 MRPL14Q6P1L8 145 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 TMPRSS12Q86WS5 348 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 RNF130Q86XS8 419 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 PTOV1Q86YD1 416 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 MICU2Q8IYU8 434 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 OR2T12Q8NG77 320 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 STT3BQ8TCJ2 826 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 PNPT1Q8TCS8 783 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 MIPOL1Q8TD10 442 aa13.79□□□□□ -0.2
SHKBP1-211ENST00000595945 GIMAP5Q96F15 307 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms