RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 C7orf57Q8NEG2 295 aa15.89■□□□□ 0.13
RETREG3-210ENST00000590541 ZNF592Q92610 1267 aa15.89■□□□□ 0.13
RETREG3-210ENST00000590541 SPACA9Q96E40 222 aaPredicted RBP15.89■□□□□ 0.13
RETREG3-210ENST00000590541 Q96MF0 132 aa15.89■□□□□ 0.13
RETREG3-210ENST00000590541 SERINC2Q96SA4 455 aa15.89■□□□□ 0.13
RETREG3-210ENST00000590541 ATOH8Q96SQ7 321 aa15.89■□□□□ 0.13
RETREG3-210ENST00000590541 FUT8Q9BYC5 575 aa15.89■□□□□ 0.13
RETREG3-210ENST00000590541 REXO4Q9GZR2 422 aaKnown RBP15.89■□□□□ 0.13
RETREG3-210ENST00000590541 ACSS3Q9H6R3 686 aa15.89■□□□□ 0.13
RETREG3-210ENST00000590541 OPTCQ9UBM4 332 aa15.89■□□□□ 0.13
RETREG3-210ENST00000590541 ADGRE2Q9UHX3 823 aa15.89■□□□□ 0.13
RETREG3-210ENST00000590541 CHCHD2Q9Y6H1 151 aaPredicted RBP15.89■□□□□ 0.13
RETREG3-210ENST00000590541 SUPT3HB4E1H0 165 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 EEF1E1-BLOC1S5C9J1V9 151 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 K7EPI3 171 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 SMAD7O15105 426 aaKnown RBP15.88■□□□□ 0.13
RETREG3-210ENST00000590541 EEF1E1O43324 174 aaKnown RBP15.88■□□□□ 0.13
RETREG3-210ENST00000590541 LDB3O75112 727 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 SUPT3HO75486 399 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 CTAGE8P0CG41 777 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 KCNC1P48547 511 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 CHIT1Q13231 466 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 EFTUD2Q15029 972 aaKnown RBP eCLIP15.88■□□□□ 0.13
RETREG3-210ENST00000590541 ACAP2Q15057 778 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 MROH9Q5TGP6 573 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 METTL2BQ6P1Q9 378 aaKnown RBP15.88■□□□□ 0.13
RETREG3-210ENST00000590541 CTAGE4Q8IX94 777 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 C9orf40Q8IXQ3 194 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 NUBPLQ8TB37 319 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 HSPBAP1Q96EW2 488 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 PRDM14Q9GZV8 571 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 COPS7BQ9H9Q2 264 aaPredicted RBP15.88■□□□□ 0.13
RETREG3-210ENST00000590541 ZNF490Q9ULM2 529 aaPredicted RBP15.88■□□□□ 0.13
RETREG3-210ENST00000590541 COL6A5A8TX70 2615 aa15.88■□□□□ 0.13
RETREG3-210ENST00000590541 MBD3L4A6NDZ8 208 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-210ENST00000590541 MBD3L3A6NE82 208 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-210ENST00000590541 MBD3L5A6NJ08 208 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-210ENST00000590541 C2P06681 752 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 EPB42P16452 691 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 CTSSP25774 331 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 SERPINB8P50452 374 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 MTTPP55157 894 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 PPP2R2BQ00005 443 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 TBL3Q12788 808 aaKnown RBP15.87■□□□□ 0.13
RETREG3-210ENST00000590541 DLG1Q12959 904 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 SERTAD2Q14140 314 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 TMEM35AQ53FP2 167 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 ABHD17CQ6PCB6 329 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 VN1R5Q7Z5H4 357 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 OR10G3Q8NGC4 313 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 MBD3L2Q8NHZ7 208 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-210ENST00000590541 SLC22A8Q8TCC7 542 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 SMPDL3BQ92485 455 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 EXT2Q93063 718 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 ESAMQ96AP7 390 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 NXNL1Q96CM4 212 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 JSRP1Q96MG2 331 aaPredicted RBP15.87■□□□□ 0.13
RETREG3-210ENST00000590541 DACH2Q96NX9 599 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 KCNC2Q96PR1 638 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 FMO2Q99518 471 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 PIP5K1AQ99755 562 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 SNX15Q9NRS6 342 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 CNIH4Q9P003 139 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 COPS7AQ9UBW8 275 aa15.87■□□□□ 0.13
RETREG3-210ENST00000590541 CNOT11Q9UKZ1 510 aaKnown RBP15.87■□□□□ 0.13
RETREG3-210ENST00000590541 CD8B2A6NJW9 211 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 PRAMEF4O60810 478 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 SMPD2O60906 423 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 KLHL2O95198 593 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 LRATO95237 230 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 IGKV3-11P04433 115 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 EPORP19235 508 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 GDF1P27539 372 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 TYK2P29597 1187 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 OPRM1P35372 400 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 SERPINB9P50453 376 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 ALDH18A1P54886 795 aaKnown RBP15.86■□□□□ 0.13
RETREG3-210ENST00000590541 ID2Q02363 134 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 PRAMEF9Q5VWM5 478 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 ADNP2Q6IQ32 1131 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 MED27Q6P2C8 311 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 PRSS57Q6UWY2 283 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 LAS2Q8IYD9 372 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 PM20D2Q8IYS1 436 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 CENPLQ8N0S6 344 aaPredicted RBP15.86■□□□□ 0.13
RETREG3-210ENST00000590541 SLC15A4Q8N697 577 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 ANKRD9Q96BM1 317 aaPredicted RBP15.86■□□□□ 0.13
RETREG3-210ENST00000590541 SENP5Q96HI0 755 aaPredicted RBP15.86■□□□□ 0.13
RETREG3-210ENST00000590541 TRIB1Q96RU8 372 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 TBCDQ9BTW9 1192 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 BDH2Q9BUT1 245 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 PRDM7Q9NQW5 492 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 NINJ2Q9NZG7 142 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 TSC22D4Q9Y3Q8 395 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 TNPO3Q9Y5L0 923 aaKnown RBP15.86■□□□□ 0.13
RETREG3-210ENST00000590541 IKBKGQ9Y6K9 419 aa15.86■□□□□ 0.13
RETREG3-210ENST00000590541 HIVEP2P31629 2446 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 FREM3P0C091 2139 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 A0A096LPK6 155 aa15.85■□□□□ 0.13
RETREG3-210ENST00000590541 TRIM64A6NGJ6 449 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms