RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SRD5A2P31213 254 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 ARHGDIBP52566 201 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 NAGLUP54802 743 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 LCP2Q13094 533 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 ZNF273Q14593 569 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 KRBOX4Q5JUW0 171 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 ACER2Q5QJU3 275 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 SHEQ5VZ18 495 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 TXNRD3NBQ6F5E7 133 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 SLC30A6Q6NXT4 461 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 ALKBH5Q6P6C2 394 aaKnown RBP1.24□□□□□ -2.21
CCDC93-209ENST00000488908 MEX3DQ86XN8 651 aaKnown RBP1.24□□□□□ -2.21
CCDC93-209ENST00000488908 GPR65Q8IYL9 337 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 ZNF444Q8N0Y2 327 aaPredicted RBP1.24□□□□□ -2.21
CCDC93-209ENST00000488908 GVQW1Q8N7I0 195 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 RNF149Q8NC42 400 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 ICA1LQ8NDH6 482 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 TCP11Q8WWU5 503 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 NAA11Q9BSU3 229 aaPredicted RBP1.24□□□□□ -2.21
CCDC93-209ENST00000488908 INPP5KQ9BT40 448 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 INPP5EQ9NRR6 644 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 TAS2R16Q9NYV7 291 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 CIDEBQ9UHD4 219 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 ZNF221Q9UK13 617 aa1.24□□□□□ -2.21
CCDC93-209ENST00000488908 NOCTQ9UK39 431 aaKnown RBP1.24□□□□□ -2.21
CCDC93-209ENST00000488908 URADA6NGE7 173 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 DLGAP1O14490 977 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 CCSO14618 274 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 EIF5BO60841 1220 aaKnown RBP1.23□□□□□ -2.21
CCDC93-209ENST00000488908 FCGR3BO75015 233 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 RPN1P04843 607 aaKnown RBP1.23□□□□□ -2.21
CCDC93-209ENST00000488908 VIMP08670 466 aaKnown RBP1.23□□□□□ -2.21
CCDC93-209ENST00000488908 TCF4P15884 667 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 GMPSP49915 693 aaPredicted RBP1.23□□□□□ -2.21
CCDC93-209ENST00000488908 RPL27P61353 136 aaKnown RBP1.23□□□□□ -2.21
CCDC93-209ENST00000488908 PAX5Q02548 391 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 CAMK2DQ13557 499 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 ZNF528Q3MIS6 628 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 ZSCAN25Q6NSZ9 544 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 SPATA21Q7Z572 469 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 ADAMTSL2Q86TH1 951 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 DZIP1Q86YF9 867 aaKnown RBP1.23□□□□□ -2.21
CCDC93-209ENST00000488908 FAM219AQ8IW50 185 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 CCAR2Q8N163 923 aaKnown RBP1.23□□□□□ -2.21
CCDC93-209ENST00000488908 KIF18AQ8NI77 898 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 HEXDCQ8WVB3 486 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 SLC25A38Q96DW6 304 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 SLC35E1Q96K37 410 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 RAB3IPQ96QF0 476 aaPredicted RBP1.23□□□□□ -2.21
CCDC93-209ENST00000488908 PLEKHF1Q96S99 279 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 FERMT1Q9BQL6 677 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 ST6GALNAC5Q9BVH7 336 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 TXLNGYQ9BZA5 131 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 PHF11Q9UIL8 331 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 TTLL3Q9Y4R7 772 aa1.23□□□□□ -2.21
CCDC93-209ENST00000488908 PFASO15067 1338 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 ACEP12821 1306 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 ILVBLA1L0T0 632 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 HTR3EA5X5Y0 456 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 PLOD3O60568 738 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 TBX10O75333 385 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 UFL1O94874 794 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 IGHV3-9P01782 118 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 PVRP15151 417 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 ADRA2CP18825 462 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 GABRR1P24046 479 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 PTAFRP25105 342 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 RAD52P43351 418 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 NPBWR1P48145 328 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 RAD23AP54725 363 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 ABRQ12979 859 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 UNC50Q53HI1 259 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 LBHQ53QV2 105 aaPredicted RBP1.22□□□□□ -2.21
CCDC93-209ENST00000488908 TOR1AIP1Q5JTV8 583 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 LYPLAL1Q5VWZ2 237 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 FAM91A1Q658Y4 838 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 ZNF770Q6IQ21 691 aaPredicted RBP1.22□□□□□ -2.21
CCDC93-209ENST00000488908 IL34Q6ZMJ4 242 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 OTOAQ7RTW8 1153 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 ANKRD46Q86W74 232 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 RNF182Q8N6D2 247 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 SEPT8Q92599 483 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 RIT1Q92963 219 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 VPS33AQ96AX1 596 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 RAB3CQ96E17 227 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 CNDP2Q96KP4 475 aaKnown RBP1.22□□□□□ -2.21
CCDC93-209ENST00000488908 PRMT1Q99873 361 aaKnown RBP1.22□□□□□ -2.21
CCDC93-209ENST00000488908 ELOVL4Q9GZR5 314 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 LMAN1LQ9HAT1 526 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 NKIRAS2Q9NYR9 191 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 GMEB2Q9UKD1 530 aa1.22□□□□□ -2.21
CCDC93-209ENST00000488908 TRBV6-6A0A0A6YYG2 114 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 CCDC162PA2VCL2 907 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 KBTBD13C9JR72 458 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 P4HA2O15460 535 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 CSO75390 466 aaKnown RBP1.21□□□□□ -2.22
CCDC93-209ENST00000488908 CSDE1O75534 798 aaKnown RBP1.21□□□□□ -2.22
CCDC93-209ENST00000488908 MMP23AO75900 390 aa1.21□□□□□ -2.22
CCDC93-209ENST00000488908 LETM1O95202 739 aaPredicted RBP1.21□□□□□ -2.22
CCDC93-209ENST00000488908 SLC2A10O95528 541 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms