RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CCDC63Q8NA47 563 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 ZFP62Q8NB50 900 aaPredicted RBP11.92□□□□□ -0.5
HDAC1-209ENST00000484305 OR2M7Q8NG81 312 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 RDH11Q8TC12 318 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 APIPQ96GX9 242 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 MAGED4Q96JG8 741 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 WWTR1Q9GZV5 400 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 TNFRSF12AQ9NP84 129 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 HEY2Q9UBP5 337 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 MCM8Q9UJA3 840 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 TINAGQ9UJW2 476 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 DNAJC13O75165 2243 aa11.92□□□□□ -0.5
HDAC1-209ENST00000484305 EXPH5Q8NEV8 1989 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 SERTM1A2A2V5 107 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 OR6C76A6NM76 312 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 CCL21O00585 134 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 ERAL1O75616 437 aaKnown RBP11.91□□□□□ -0.5
HDAC1-209ENST00000484305 CCL3P10147 92 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 S1PR1P21453 382 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 CNR1P21554 472 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 NT5EP21589 574 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 SERPINB3P29508 390 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 DEKP35659 375 aaKnown RBP11.91□□□□□ -0.5
HDAC1-209ENST00000484305 FEN1P39748 380 aaKnown RBP11.91□□□□□ -0.5
HDAC1-209ENST00000484305 ALDH9A1P49189 494 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 NR0B1P51843 470 aaKnown RBP11.91□□□□□ -0.5
HDAC1-209ENST00000484305 NAA20P61599 178 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 TRA2BP62995 288 aaKnown RBP11.91□□□□□ -0.5
HDAC1-209ENST00000484305 DUSP2Q05923 314 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 BTKQ06187 659 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 ACSM2AQ08AH3 577 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 MGAT2Q10469 447 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 FUT7Q11130 342 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 ZNF791Q3KP31 576 aaPredicted RBP11.91□□□□□ -0.5
HDAC1-209ENST00000484305 CMPK2Q5EBM0 449 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 CFAP157Q5JU67 520 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 ACSM2BQ68CK6 577 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 EMBQ6PCB8 327 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 Q6ZPB1 254 aaPredicted RBP11.91□□□□□ -0.5
HDAC1-209ENST00000484305 FGD2Q7Z6J4 655 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 TRABD2AQ86V40 505 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 SLC15A4Q8N697 577 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 ZNF615Q8N8J6 731 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 GOLM1Q8NBJ4 401 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 OR52N2Q8NGI0 321 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 SLC22A8Q8TCC7 542 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 KLHL29Q96CT2 875 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 C11orf24Q96F05 449 aaPredicted RBP11.91□□□□□ -0.5
HDAC1-209ENST00000484305 SGCZQ96LD1 299 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 SHCBP1LQ9BZQ2 653 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 OR10A5Q9H207 317 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 LGALS13Q9UHV8 139 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 PLLPQ9Y342 182 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 NCKAP5O14513 1909 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 NAV2Q8IVL1 2488 aa11.91□□□□□ -0.5
HDAC1-209ENST00000484305 NCOA6Q14686 2063 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-209ENST00000484305 A0A1B0GTH9 108 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 C2orf92A0A1B0GVN3 265 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 GNG14A0A1W2PPG7 69 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 CCDC151A5D8V7 595 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 GOLGA6L10A6NI86 522 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 FAM166BA8MTA8 275 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 PCDH7O60245 1069 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 P04436 131 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 ATP1B1P05026 303 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 IL3P08700 152 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 ABOP16442 354 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 CSNK2A2P19784 350 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-209ENST00000484305 TIA1P31483 386 aaKnown RBP eCLIP11.9□□□□□ -0.5
HDAC1-209ENST00000484305 SOX18P35713 384 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 DNASE1L1P49184 302 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 IFFO1Q0D2I5 559 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 PCLAFQ15004 111 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 ERCC6LQ2NKX8 1250 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 PRICKLE4Q2TBC4 344 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 SPIN4Q56A73 249 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 LIPMQ5VYY2 423 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 FAM111BQ6SJ93 734 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 TMEM64Q6YI46 380 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 BNC2Q6ZN30 1099 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-209ENST00000484305 FAM47EQ6ZV65 393 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 C10orf107Q8IVU9 208 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 SRRM1Q8IYB3 904 aaKnown RBP11.9□□□□□ -0.5
HDAC1-209ENST00000484305 RIBC1Q8N443 379 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-209ENST00000484305 ZNF441Q8N8Z8 693 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 BANPQ8N9N5 519 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 SIMC1Q8NDZ2 872 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 ADCY4Q8NFM4 1077 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 C16orf78Q8WTQ4 265 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 CAVIN3Q969G5 261 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 SPACA9Q96E40 222 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-209ENST00000484305 CNRIP1Q96F85 164 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-209ENST00000484305 CCDC120Q96HB5 630 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 APOPT1Q96IL0 206 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 ZNF681Q96N22 645 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 FAM173AQ9BQD7 235 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 FAIM2Q9BWQ8 316 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 EBPLQ9BY08 206 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 TTTY12Q9BZ98 90 aa11.9□□□□□ -0.5
HDAC1-209ENST00000484305 DEFB127Q9H1M4 99 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms