RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 NME6O75414 186 aaPredicted RBP11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 LALBAP00709 142 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 MMP11P24347 488 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 RAB25P57735 213 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 TMEM115Q12893 351 aaPredicted RBP11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 COL9A2Q14055 689 aaPredicted RBP11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 GINS1Q14691 196 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 SYPL1Q16563 259 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 ZNF628Q5EBL2 1059 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 CEP78Q5JTW2 689 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 ZDHHC20Q5W0Z9 365 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 CNIH2Q6PI25 160 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 CLDN22Q8N7P3 220 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 GDPD1Q8N9F7 314 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 OR5D16Q8NGK9 328 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 OR2A12Q8NGT7 310 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 KCTD7Q96MP8 289 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 GFM1Q96RP9 751 aaKnown RBP11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 MRPL9Q9BYD2 267 aaKnown RBP11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 CPEB1Q9BZB8 566 aaKnown RBP11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 SERHL2Q9H4I8 314 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 EGLN3Q9H6Z9 239 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 STARD7Q9NQZ5 370 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 TESQ9UGI8 421 aaKnown RBP11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 A4GNTQ9UNA3 340 aa11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 DIMT1Q9UNQ2 313 aaKnown RBP11.12□□□□□ -0.63
PDZRN3-203ENST00000462146 DVL2O14641 736 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 ZNF197O14709 1029 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 SEC14L5O43304 696 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 SH3BP5O60239 455 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 LEFTY1O75610 366 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 EPHX1P07099 455 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 ALAS2P22557 587 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 WEE1P30291 646 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 VIPR1P32241 457 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 MAP2K3P46734 347 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 OCLNQ16625 522 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 SZRD1Q7Z422 152 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 TECPR1Q7Z6L1 1165 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 ZER1Q7Z7L7 766 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 IQCHQ86VS3 1027 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 CFAP206Q8IYR0 622 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 ZNF366Q8N895 744 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 ZFAND1Q8TCF1 268 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 FUZQ9BT04 418 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 PRR14Q9BWN1 585 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 RNF186Q9NXI6 227 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 CCL26Q9Y258 94 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 DYRK1BQ9Y463 629 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 LOC102723532A0A0G2JNH3 316 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 FAM25AB3EWG3 89 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 FAM25CB3EWG5 89 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 FAM25GB3EWG6 89 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 FOXE1O00358 373 aaPredicted RBP11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 HMGN4O00479 90 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 TBX6O95947 436 aaPredicted RBP11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 LGI1O95970 557 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 SLC2A2P11168 524 aaPredicted RBP11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 PRLHRP49683 370 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 P2RX3P56373 397 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 WNT4P56705 351 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 BTBD16Q32M84 506 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 ARSIQ5FYB1 569 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 LCN1P1Q5VSP4 162 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 TYW3Q6IPR3 259 aaKnown RBP11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 PLET1Q6UQ28 207 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 UNC5DQ6UXZ4 953 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 ZNF730Q6ZMV8 503 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 HTR3DQ70Z44 454 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 LAPTM4BQ86VI4 370 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 TMEM25Q86YD3 366 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 TMC8Q8IU68 726 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 Q8N402 240 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 TMEM245Q9H330 911 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 MRPL17Q9NRX2 175 aaKnown RBP11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 FBXW2Q9UKT8 454 aa11.11□□□□□ -0.63
PDZRN3-203ENST00000462146 C5orf42Q9H799 3197 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 SRPRAP08240 638 aaKnown RBP11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 IFI30P13284 250 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 EPHB3P54753 998 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 MANFP55145 182 aaKnown RBP11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 BNC1Q01954 994 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 TAP2Q03519 686 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 MAP4K2Q12851 820 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 B3GLCTQ6Y288 498 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 KIF18BQ86Y91 864 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 TRAM1L1Q8N609 369 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 DTX3Q8N9I9 347 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 TMEM145Q8NBT3 493 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 GALNT6Q8NCL4 622 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 GRPEL2Q8TAA5 225 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 CYB5D2Q8WUJ1 264 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 SLC5A11Q8WWX8 675 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 SLC9A6Q92581 669 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 GLYATL1Q969I3 302 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 SENP5Q96HI0 755 aaPredicted RBP11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 ZNF354BQ96LW1 612 aa11.1□□□□□ -0.63
PDZRN3-203ENST00000462146 FOPNLQ96NB1 174 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms