RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, human

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-208	ENST00000431611	DVL2	O14641	736 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TRIM3	O75382	744 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	AIFM1	O95831	613 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	GBA	P04062	536 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CLPS	P04118	112 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SSTR4	P31391	388 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PIK3CG	P48736	1102 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	NEK2	P51955	445 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	DUSP8	Q13202	625 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	GTF2H2	Q13888	395 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ACAP2	Q15057	778 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	RPS6KA2	Q15349	733 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	MROH9	Q5TGP6	573 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	HLA-DQA1	Q5Y7H0	255 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	OR52E8	Q6IFG1	317 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	GTF2H2C	Q6P1K8	395 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TMEM64	Q6YI46	380 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	GOLGA7	Q7Z5G4	137 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ZNF441	Q8N8Z8	693 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	NINJ1	Q92982	152 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	MRRF	Q96E11	262 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	LRRC46	Q96FV0	321 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FOXC2	Q99958	501 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	RAB17	Q9H0T7	212 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CXorf21	Q9HAI6	301 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SNX15	Q9NRS6	342 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	RNF11	Q9Y3C5	154 aa		13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TNPO3	Q9Y5L0	923 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PHF3	Q92576	2039 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1E-208	ENST00000431611	INTS1	Q8N201	2190 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FOXE1	O00358	373 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PGRMC2	O15173	223 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	DIAPH2	O60879	1101 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TRAPPC6A	O75865	159 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	KRT38	O76015	456 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SNX4	O95219	450 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	EPPIN	O95925	133 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CD99	P14209	185 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	BMP5	P22003	454 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PIK3R1	P27986	724 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ASCL1	P50553	236 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FBXW4	P57775	412 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CRYZ	Q08257	329 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TRADD	Q15628	312 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ACSF3	Q4G176	576 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	KLC3	Q6P597	504 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ZDHHC24	Q6UX98	284 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	GALNT12	Q8IXK2	581 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	L3MBTL4	Q8NA19	623 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	RELL2	Q8NC24	303 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	NAXE	Q8NCW5	288 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CHDH	Q8NE62	594 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TNIP2	Q8NFZ5	429 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	WDR20	Q8TBZ3	569 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SPPL2A	Q8TCT8	520 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SECISBP2	Q96T21	854 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TIMP4	Q99727	224 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	GPATCH1	Q9BRR8	931 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CXXC4	Q9H2H0	198 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	RASSF1	Q9NS23	344 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ZNF358	Q9NW07	568 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CRIM1	Q9NZV1	1036 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CPSF2	Q9P2I0	782 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ST6GALNAC2	Q9UJ37	374 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PYCARD	Q9ULZ3	195 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611	NPFFR2	Q9Y5X5	522 aa		13.88	□□□□□ -0.19
CSNK1E-208	ENST00000431611		A0A096LPK6	155 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611		A0A1W2PS29	197 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	FAM221A	A4D161	298 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	KLHL2	O95198	593 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SIX3	O95343	332 aa	Predicted RBP	13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CLDN9	O95484	217 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ACSL3	O95573	720 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CEACAM8	P31997	349 aa	Predicted RBP	13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ARL1	P40616	181 aa	Predicted RBP	13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	MASP1	P48740	699 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TMED10	P49755	219 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	CDK9	P50750	372 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	WNT3	P56703	355 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	NRG3	P56975	720 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	RPP38	P78345	283 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	GUCY2D	Q02846	1103 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	BICRAL	Q6AI39	1079 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	METTL2B	Q6P1Q9	378 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PACS2	Q86VP3	889 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	LACC1	Q8IV20	430 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	PM20D2	Q8IYS1	436 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	RNASE6	Q93091	150 aa	Known RBP	13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ATP6V1E2	Q96A05	226 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	RILP	Q96NA2	401 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	GNRHR2	Q96P88	292 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	SERPINI1	Q99574	410 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TMUB1	Q9BVT8	246 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ANGPTL4	Q9BY76	406 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	LIME1	Q9H400	295 aa		13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	TEX10	Q9NXF1	929 aa	Predicted RBP	13.87	□□□□□ -0.19
CSNK1E-208	ENST00000431611	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms