RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 PLEKHN1Q494U1 663 aaPredicted RBP16.4■□□□□ 0.22
EPCAM-203ENST00000419334 FAM180BQ6P0A1 224 aa16.4■□□□□ 0.22
EPCAM-203ENST00000419334 TICAM1Q8IUC6 712 aa16.4■□□□□ 0.22
EPCAM-203ENST00000419334 FNDC5Q8NAU1 212 aa16.4■□□□□ 0.22
EPCAM-203ENST00000419334 OR5L2Q8NGL0 311 aa16.4■□□□□ 0.22
EPCAM-203ENST00000419334 NUBPLQ8TB37 319 aa16.4■□□□□ 0.22
EPCAM-203ENST00000419334 THAP3Q8WTV1 239 aaPredicted RBP16.4■□□□□ 0.22
EPCAM-203ENST00000419334 TSSK3Q96PN8 268 aa16.4■□□□□ 0.22
EPCAM-203ENST00000419334 OR6C76A6NM76 312 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 SLCO1B7G3V0H7 640 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 TBX19O60806 448 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 CLPSP04118 112 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 PRPS2P11908 318 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 TRHRP34981 398 aaPredicted RBP16.39■□□□□ 0.21
EPCAM-203ENST00000419334 SLC37A1P57057 533 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 MGAT2Q10469 447 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 MAP4K2Q12851 820 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 MAD2L1Q13257 205 aaPredicted RBP16.39■□□□□ 0.21
EPCAM-203ENST00000419334 TUBA3CQ13748 450 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 ZNF169Q14929 603 aaPredicted RBP16.39■□□□□ 0.21
EPCAM-203ENST00000419334 COLEC12Q5KU26 742 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 TUBA3EQ6PEY2 450 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 RNF111Q6ZNA4 994 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 C9orf40Q8IXQ3 194 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 LRRC34Q8IZ02 419 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 VWA5B2Q8N398 1253 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 CATSPER1Q8NEC5 780 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 DOK4Q8TEW6 326 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 CTHRC1Q96CG8 243 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 PPP1R36Q96LQ0 422 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 UTP23Q9BRU9 249 aaKnown RBP16.39■□□□□ 0.21
EPCAM-203ENST00000419334 NUF2Q9BZD4 464 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 EPN3Q9H201 632 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 MEAF6Q9HAF1 191 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 SLAMF7Q9NQ25 335 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 INTS9Q9NV88 658 aaKnown RBP16.39■□□□□ 0.21
EPCAM-203ENST00000419334 ASIC5Q9NY37 505 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 MAT2BQ9NZL9 334 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 MYOTQ9UBF9 498 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 BAIAP2L1Q9UHR4 511 aa16.39■□□□□ 0.21
EPCAM-203ENST00000419334 YARS2Q9Y2Z4 477 aaKnown RBP16.39■□□□□ 0.21
EPCAM-203ENST00000419334 TRAV17A0A0B4J275 112 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 MYO1GB0I1T2 1018 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 HDAC3O15379 428 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 VPS4BO75351 444 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 ITGA10O75578 1167 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 F10P00742 488 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 SSTR4P31391 388 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 CD96P40200 585 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 EMX2Q04743 252 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 PRSS53Q2L4Q9 553 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 IL23RQ5VWK5 629 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 PRICKLE2Q7Z3G6 844 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 CCDC116Q8IYX3 515 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 LIX1Q8N485 282 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 OR7G1Q8NGA0 311 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 SUN3Q8TAQ9 357 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 ZNF675Q8TD23 568 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 LRRC8CQ8TDW0 803 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 DYDC1Q8WWB3 177 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 GFM2Q969S9 779 aaKnown RBP16.38■□□□□ 0.21
EPCAM-203ENST00000419334 MTERF3Q96E29 417 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 BBS4Q96RK4 519 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 C1orf50Q9BV19 199 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 BRINP2Q9C0B6 783 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.38■□□□□ 0.21
EPCAM-203ENST00000419334 REEP4Q9H6H4 257 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 AKTIPQ9H8T0 292 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 TRIM45Q9H8W5 580 aaPredicted RBP16.38■□□□□ 0.21
EPCAM-203ENST00000419334 LUZP4Q9P127 313 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 ZNF639Q9UID6 485 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 EIF3LQ9Y262 564 aaKnown RBP16.38■□□□□ 0.21
EPCAM-203ENST00000419334 PCDHGA10Q9Y5H3 936 aa16.38■□□□□ 0.21
EPCAM-203ENST00000419334 TRPC5OSA6NMA1 111 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 ATP8B1O43520 1251 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 SLC28A2O43868 658 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 OR2J2O76002 312 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 S1PR1P21453 382 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 NTSP30990 170 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 MPIP34949 423 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 SOX18P35713 384 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 PDE7AQ13946 482 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 EBPQ15125 230 aaKnown RBP16.37■□□□□ 0.21
EPCAM-203ENST00000419334 MPEG1Q2M385 716 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 ZNF628Q5EBL2 1059 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 FAM111BQ6SJ93 734 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 SLC29A4Q7RTT9 530 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 R3HCC1LQ7Z5L2 792 aaKnown RBP16.37■□□□□ 0.21
EPCAM-203ENST00000419334 ZNF605Q86T29 641 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 WDR75Q8IWA0 830 aaKnown RBP16.37■□□□□ 0.21
EPCAM-203ENST00000419334 FAM9CQ8IZT9 166 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 ZNF615Q8N8J6 731 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 MDS2Q8NDY4 140 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 CLHC1Q8NHS4 586 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 PIWIL2Q8TC59 973 aaKnown RBP16.37■□□□□ 0.21
EPCAM-203ENST00000419334 ERP27Q96DN0 273 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 C7orf26Q96N11 449 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 OR10A5Q9H207 317 aa16.37■□□□□ 0.21
EPCAM-203ENST00000419334 LIN28AQ9H9Z2 209 aaKnown RBP16.37■□□□□ 0.21
EPCAM-203ENST00000419334 RYDENQ9NUL5 291 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms