RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 PGAM5Q96HS1 289 aa3.9□□□□□ -1.79
USH2A-202ENST00000366942 ASB16Q96NS5 453 aa3.9□□□□□ -1.79
USH2A-202ENST00000366942 TAAR6Q96RI8 345 aa3.9□□□□□ -1.79
USH2A-202ENST00000366942 UQCC2Q9BRT2 126 aa3.9□□□□□ -1.79
USH2A-202ENST00000366942 FN3KRPQ9HA64 309 aa3.9□□□□□ -1.79
USH2A-202ENST00000366942 GOLGA2P5Q9HBQ8 144 aa3.9□□□□□ -1.79
USH2A-202ENST00000366942 BAIAP2L1Q9UHR4 511 aa3.9□□□□□ -1.79
USH2A-202ENST00000366942 MEGF6O75095 1541 aa3.9□□□□□ -1.79
USH2A-202ENST00000366942 WDR91A4D1P6 747 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 CENPBD1B2RD01 187 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 LOC110117498-PIK3R3F6TDL0 507 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 MATN3O15232 486 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 LRRTM2O43300 516 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 KDELR3O43731 214 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 ADAM23O75077 832 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 PSMD10O75832 226 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 SNAPC5O75971 98 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 KLKB1P03952 638 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 HIST1H1TP22492 207 aaPredicted RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 CSNK1A1P48729 337 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 SMAGPQ0VAQ4 97 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 ARFRP1Q13795 201 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 DAG1Q14118 895 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 ZNF169Q14929 603 aaPredicted RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 ZNF829Q3KNS6 432 aaPredicted RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 ZNF718Q3SXZ3 478 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 KCTD16Q68DU8 428 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 TMIGD1Q6UXZ0 262 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 HTR3DQ70Z44 454 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 ZNF765Q7L2R6 523 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 SHKBP1Q8TBC3 707 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 NANPQ8TBE9 248 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 OXER1Q8TDS5 423 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 PIK3R3Q92569 461 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 KCTD15Q96SI1 283 aaPredicted RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 CCL19Q99731 98 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 MYOZ1Q9NP98 299 aaPredicted RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 CYSLTR2Q9NS75 346 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 CMTM6Q9NX76 183 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 NAALADL1Q9UQQ1 740 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 TP53TG5Q9Y2B4 290 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 NEU2Q9Y3R4 380 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 IFNL4K9M1U5 179 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 PLK4O00444 970 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 EIF1AYO14602 144 aaKnown RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 B4GALT5O43286 388 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 CNIH1O95406 144 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 CSTAP01040 98 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 HSD3B1P14060 373 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 ELK4P28324 431 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 ARL2P36404 184 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 NCBP2P52298 156 aaKnown RBP eCLIP3.89□□□□□ -1.79
USH2A-202ENST00000366942 SLC35A1P78382 337 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 ZP2Q05996 745 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 SERINC3Q13530 473 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 NHSL2Q5HYW2 709 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 LRRC38Q5VT99 294 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 MSANTD1Q6ZTZ1 278 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 NET1Q7Z628 596 aaPredicted RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 PLPP6Q8IY26 295 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 MKXQ8IYA7 352 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 HAS2Q92819 552 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 TANKQ92844 425 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 NTAN1Q96AB6 310 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 ISG20Q96AZ6 181 aaKnown RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 RNF145Q96MT1 663 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 CDK15Q96Q40 435 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 PANX1Q96RD7 426 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 AGXT2Q9BYV1 514 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 SMOC2Q9H3U7 446 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 IL37Q9NZH6 218 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 CNIH4Q9P003 139 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 SARDHQ9UL12 918 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 NOVA2Q9UNW9 492 aaKnown RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 MED16Q9Y2X0 877 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 MSRB2Q9Y3D2 182 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 TMEM14AQ9Y6G1 99 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 PAPPAQ13219 1627 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 CICQ96RK0 1608 aaPredicted RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 ABCC6O95255 1503 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 UBE2QL1A1L167 161 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 OR6C70A6NIJ9 312 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 ZNF785A8K8V0 405 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 SULT1C4O75897 302 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 SLITRK5O94991 958 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 VAMP5O95183 116 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 DIRAS3O95661 229 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 APOA2P02652 100 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 ANXA2P07355 339 aaKnown RBP3.89□□□□□ -1.79
USH2A-202ENST00000366942 TSPAN19P0C672 248 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 DRD5P21918 477 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 GCGRP47871 477 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 MAP2K6P52564 334 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 EFNA3P52797 238 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 TSPAN5P62079 268 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 RAC1P63000 192 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 KCNMB1Q16558 191 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 MZT2AQ6P582 158 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 CYP2R1Q6VVX0 501 aa3.89□□□□□ -1.79
USH2A-202ENST00000366942 C2orf73Q8N5S3 287 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms