RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 MNTQ99583 582 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 IL23AQ9NPF7 189 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 C5orf51A6NDU8 294 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 NPC1O15118 1278 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 SEMA3DO95025 777 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 PYCR1P32322 319 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 C22orf42Q6IC83 251 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 EIF5AL1Q6IS14 154 aaKnown RBP16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 C7orf57Q8NEG2 295 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR5T3Q8NGG3 340 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 KHSRPQ92945 711 aaKnown RBP eCLIP16.29■□□□□ 0.22e-7■■■■■ 31.2
TRAPPC11-201ENST00000334690 FKBP10Q96AY3 582 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 ACPTQ9BZG2 426 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 SEC61A2Q9H9S3 476 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 TMEM14AQ9Y6G1 99 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 LAMA4Q16363 1823 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 H3BMQ9 156 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 PSMD9O00233 223 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 PORP16435 677 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 RGRP47804 291 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 RUNX3Q13761 415 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 MICAQ29983 383 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 KLHL26Q53HC5 615 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 KCTD18Q6PI47 426 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 HTR3DQ70Z44 454 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 SLC39A11Q8N1S5 342 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 SLC44A3Q8N4M1 653 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 RELTQ969Z4 430 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 COG8Q96MW5 612 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 KCNK12Q9HB15 430 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 FEZF1A0PJY2 475 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 BMPR1AP36894 532 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 POU4F2Q12837 409 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 NDUFAF5Q5TEU4 345 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 Q8N402 240 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 MS4A15Q8N5U1 240 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 C12orf76Q8N812 135 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 TTYH2Q9BSA4 534 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 MAU2Q9Y6X3 613 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 GRXCR1A8MXD5 290 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 BCAS1O75363 584 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 ALDOCP09972 364 aaKnown RBP16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 TBRG1Q3YBR2 411 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 HSD17B12Q53GQ0 312 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 THOC7Q6I9Y2 204 aaKnown RBP16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR4K17Q8NGC6 315 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZNF431Q8TF32 576 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 TESCQ96BS2 214 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 MMABQ96EY8 250 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 CCDC32Q9BV29 185 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 TRPV4Q9HBA0 871 aa16.29■□□□□ 0.2
TRAPPC11-201ENST00000334690 GXYLT2A0PJZ3 443 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 CD40LGP29965 261 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 SEMA3BQ13214 749 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 GAS6Q14393 721 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 SLC39A5Q6ZMH5 540 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 LMX1AQ8TE12 382 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 CLCC1Q96S66 551 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 CHMP1AQ9HD42 196 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 HSFX1Q9UBD0 423 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 A0A1B0GVT2 93 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 KLF8O95600 359 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 APBB3O95704 486 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 CST5P28325 142 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 CXCR4P61073 352 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 IER5LQ5T953 404 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 LSMEM2Q8N112 164 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 TMEM234Q8WY98 164 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 GTF2H4Q92759 462 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 NPLQ9BXD5 320 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 UCKL1Q9NWZ5 548 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 SCRN3Q0VDG4 424 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 CEACAM19Q7Z692 300 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR56A3Q8NH54 315 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 ITPKCQ96DU7 683 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 SHDQ96IW2 340 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 PTCHD1Q96NR3 888 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 MTHFD2LQ9H903 347 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 C14orf119Q9NWQ9 140 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 KLRF1Q9NZS2 232 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZNF69Q9UC07 566 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 KANTRA0A1W2PQU2 76 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 CPED1A4D0V7 1026 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR6C74A6NCV1 312 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 L7N2F9 121 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 MRPL3P09001 348 aaKnown RBP16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 VIPR2P41587 438 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 ARPC4P59998 168 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 ELOCQ15369 112 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 SCP2D1Q9UJQ7 156 aa16.28■□□□□ 0.2
TRAPPC11-201ENST00000334690 FBP2O00757 339 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 AXIN1O15169 862 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 HOXD9P28356 352 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 TCEAL6Q6IPX3 200 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 ARHGAP11AQ6P4F7 1023 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 GPR149Q86SP6 731 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 SLC15A4Q8N697 577 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 CSNK1A1LQ8N752 337 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 ISL2Q96A47 359 aa16.27■□□□□ 0.2
TRAPPC11-201ENST00000334690 SH3YL1Q96HL8 342 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms