RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 HSD17B3P37058 310 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 MAGEA5P43359 124 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 DNASE1L1P49184 302 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 XKP51811 444 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 NR0B1P51843 470 aaKnown RBP16.35■□□□□ 0.21
HDDC3-201ENST00000330334 NTRK2Q16620 822 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 LETMD1Q6P1Q0 360 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 ACAD11Q709F0 780 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 GALNT12Q8IXK2 581 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 SRRM1Q8IYB3 904 aaKnown RBP16.35■□□□□ 0.21
HDDC3-201ENST00000330334 FBXW8Q8N3Y1 598 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 OR7G1Q8NGA0 311 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 LILRB4Q8NHJ6 448 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 ACMSDQ8TDX5 336 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 RND1Q92730 232 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 TREX2Q9BQ50 279 aaPredicted RBP16.35■□□□□ 0.21
HDDC3-201ENST00000330334 TRIM8Q9BZR9 551 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 ENKD1Q9H0I2 346 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 PROK2Q9HC23 129 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 ZFP64Q9NPA5 681 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 QPCTLQ9NXS2 382 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 TUBA8Q9NY65 449 aaPredicted RBP16.35■□□□□ 0.21
HDDC3-201ENST00000330334 TRPS1Q9UHF7 1281 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 ZNF225Q9UK10 706 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 CES1P1Q9UKY3 287 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 PCDHA9Q9Y5H5 950 aa16.35■□□□□ 0.21
HDDC3-201ENST00000330334 DNAJC13O75165 2243 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 A0A1B0GTL3 188 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 C2orf92A0A1B0GVN3 265 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 C1orf226A1L170 272 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 NPIPA2E9PIF3 369 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 NPIPA3F8WFD2 350 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 C19orf84I3L1E1 186 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 PPP6CO00743 305 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 RIPK2O43353 540 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 PDYNP01213 254 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 HSD3B1P14060 373 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 CPMP14384 443 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 PORP16435 677 aaPredicted RBP16.34■□□□□ 0.21
HDDC3-201ENST00000330334 TAC1P20366 129 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 HSD3B2P26439 372 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 CHRNB4P30926 498 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 PIGAP37287 484 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 KIR3DL1P43629 444 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 MAPK12P53778 367 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 CDH13P55290 713 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 TRA2BP62995 288 aaKnown RBP16.34■□□□□ 0.21
HDDC3-201ENST00000330334 CLCQ05315 142 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 GALNT1Q10472 559 aaPredicted RBP16.34■□□□□ 0.21
HDDC3-201ENST00000330334 TBCELQ5QJ74 424 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 COMMD6Q7Z4G1 85 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 LRRC25Q8N386 305 aaPredicted RBP16.34■□□□□ 0.21
HDDC3-201ENST00000330334 ZNF615Q8N8J6 731 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 SELENOMQ8WWX9 145 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 GAL3ST4Q96RP7 486 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 SMC6Q96SB8 1091 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 SECISBP2Q96T21 854 aaKnown RBP16.34■□□□□ 0.21
HDDC3-201ENST00000330334 ACKR4Q9NPB9 350 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 FARSBQ9NSD9 589 aaKnown RBP16.34■□□□□ 0.21
HDDC3-201ENST00000330334 BOKQ9UMX3 212 aaPredicted RBP16.34■□□□□ 0.21
HDDC3-201ENST00000330334 SLC12A4Q9UP95 1085 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 PCDHGB3Q9Y5G1 929 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 CACNA1CQ13936 2221 aa16.34■□□□□ 0.21
HDDC3-201ENST00000330334 PDZD2O15018 2839 aa16.33■□□□□ 0.21
HDDC3-201ENST00000330334 FIGNL2A6NMB9 653 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 HOXD4P09016 255 aaPredicted RBP16.33■□□□□ 0.2
HDDC3-201ENST00000330334 IMPDH1P20839 514 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 S1PR1P21453 382 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 ACVR2AP27037 513 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 KCNJ2P63252 427 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 MAP4K2Q12851 820 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 RASA2Q15283 850 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 SGO1Q5FBB7 561 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 ZNF678Q5SXM1 525 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 SLC48A1Q6P1K1 146 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 RPS27LQ71UM5 84 aaKnown RBP16.33■□□□□ 0.2
HDDC3-201ENST00000330334 ZNF295-AS1Q8N0V1 137 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 OR10G3Q8NGC4 313 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 DOK4Q8TEW6 326 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 ADIPOR1Q96A54 375 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 SARAFQ96BY9 339 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 TM4SF18Q96CE8 201 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 C14orf79Q96F83 325 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 ZNF382Q96SR6 550 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 TXLNGYQ9BZA5 131 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 TMEM216Q9P0N5 145 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 VPS29Q9UBQ0 182 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 CNOT11Q9UKZ1 510 aaKnown RBP16.33■□□□□ 0.2
HDDC3-201ENST00000330334 PSME2Q9UL46 239 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 OTOGQ6ZRI0 2925 aa16.33■□□□□ 0.2
HDDC3-201ENST00000330334 ATP6AP2A0A1C7CYW4 349 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 GOLGA6L10A6NI86 522 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 TP53I11O14683 189 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 DLX3O60479 287 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 ATP6AP2O75787 350 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 KRT6AP02538 564 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 KRT6BP04259 564 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 ATP1B1P05026 303 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 GSTA1P08263 222 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 ATP5F1P24539 256 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms