RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MVB12BQ9H7P6 319 aa8.24□□□□□ -1.09
CLK1-201ENST00000321356 WASH6PQ9NQA3 447 aa8.24□□□□□ -1.09
CLK1-201ENST00000321356 MAN2C1Q9NTJ4 1040 aa8.24□□□□□ -1.09
CLK1-201ENST00000321356 ACSS1Q9NUB1 689 aaPredicted RBP8.24□□□□□ -1.09
CLK1-201ENST00000321356 TXNL4BQ9NX01 149 aaKnown RBP8.24□□□□□ -1.09
CLK1-201ENST00000321356 TAS2R7Q9NYW3 318 aa8.24□□□□□ -1.09
CLK1-201ENST00000321356 TBX21Q9UL17 535 aa8.24□□□□□ -1.09
CLK1-201ENST00000321356 WNT6Q9Y6F9 365 aa8.24□□□□□ -1.09
CLK1-201ENST00000321356 TCF20Q9UGU0 1960 aaKnown RBP8.24□□□□□ -1.09
CLK1-201ENST00000321356 DENND4AQ7Z401 1863 aa8.24□□□□□ -1.09
CLK1-201ENST00000321356 A0A1W2PQ09 198 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 STK25O00506 426 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 AP3D1O14617 1153 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 PLD2O14939 933 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 MYL12BO14950 172 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 IDH3BO43837 385 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 VEGFDO43915 354 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 NME6O75414 186 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 FGF19O95750 216 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 RAB36O95755 333 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 CISD3P0C7P0 127 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 MSL3P1P0C860 447 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ACADMP11310 421 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 MMP11P24347 488 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 CA8P35219 290 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 GPR1P46091 355 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 GSTM5P46439 218 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 GIPRP48546 466 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 TGM4P49221 684 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 CDK5Q00535 292 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 REEP5Q00765 189 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 HYAL2Q12891 473 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 HSPB3Q12988 150 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 RPA4Q13156 261 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ARHGAP19Q14CB8 494 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ENTPD8Q5MY95 495 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 RAET1GQ6H3X3 334 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 PODNL1Q6PEZ8 512 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 SLC39A5Q6ZMH5 540 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ZER1Q7Z7L7 766 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 C17orf64Q86WR6 236 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 RAB43Q86YS6 212 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 DCUN1D3Q8IWE4 304 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 LINC00471Q8N535 108 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 IQCF1Q8N6M8 205 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 MORN4Q8NDC4 146 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 OR5AR1Q8NGP9 310 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 OR9Q1Q8NGQ5 310 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 CREB3L4Q8TEY5 395 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ZBED6CLQ96FA7 236 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 ZNF582Q96NG8 517 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 TOX2Q96NM4 488 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 QRFPRQ96P65 431 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 MED18Q9BUE0 208 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 YIPF2Q9BWQ6 316 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 TPK1Q9H3S4 243 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 NT5DC2Q9H857 520 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 FGF20Q9NP95 211 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 ZSCAN32Q9NX65 697 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 SEC14L3Q9UDX4 400 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 PLEKHB1Q9UF11 243 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 PLAGL1Q9UM63 463 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ASF1AQ9Y294 204 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 PCYT1BQ9Y5K3 369 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 PTPRSQ13332 1948 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 MUC22E2RYF6 1773 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 TMEM129A0AVI4 362 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 HMX3A6NHT5 357 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 TLX2O43763 284 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 SLC28A2O43868 658 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 TMPRSS11DO60235 418 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 CYP7B1O75881 506 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 CDRT1O95170 752 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 CXCL14O95715 111 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 EPPINO95925 133 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 PRNPP04156 253 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 LINC00271P0C7V0 271 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 C6P13671 934 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 TNNI3P19429 210 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 CXCR2P25025 360 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ETV5P41161 510 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 CCT3P49368 545 aaKnown RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 ETV1P50549 477 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 SCN1BQ07699 218 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 PIN1Q13526 163 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 GINS1Q14691 196 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 SYPL1Q16563 259 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 TRIM60Q495X7 471 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 SPDYE7PQ495Y7 208 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 PLK5Q496M5 336 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 ACSM5Q6NUN0 579 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 C1orf94Q6P1W5 598 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 XKRXQ6PP77 449 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 HSDL2Q6YN16 418 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 MRGPREQ86SM8 312 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 GDPD1Q8N9F7 314 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 OR4K5Q8NGD3 323 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 KIAA1143Q96AT1 154 aaPredicted RBP8.23□□□□□ -1.09
CLK1-201ENST00000321356 ARRDC3Q96B67 414 aa8.23□□□□□ -1.09
CLK1-201ENST00000321356 NELL2Q99435 816 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms