RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 C11orf91Q3C1V1 193 aa10.09□□□□□ -0.79
SCARB2-224ENST00000640880 ALG1LQ6GMV1 187 aa10.09□□□□□ -0.79
SCARB2-224ENST00000640880 ALDH16A1Q8IZ83 802 aa10.09□□□□□ -0.79
SCARB2-224ENST00000640880 ZDHHC1Q8WTX9 485 aa10.09□□□□□ -0.79
SCARB2-224ENST00000640880 RNF34Q969K3 372 aa10.09□□□□□ -0.79
SCARB2-224ENST00000640880 CABP1Q9NZU7 370 aa10.09□□□□□ -0.79
SCARB2-224ENST00000640880 HCN4Q9Y3Q4 1203 aa10.09□□□□□ -0.79
SCARB2-224ENST00000640880 EMILIN1Q9Y6C2 1016 aa10.09□□□□□ -0.79
SCARB2-224ENST00000640880 PDGFAP04085 211 aa10.08□□□□□ -0.8
SCARB2-224ENST00000640880 NOS2P35228 1153 aa10.08□□□□□ -0.8
SCARB2-224ENST00000640880 ZAP70P43403 619 aa10.08□□□□□ -0.8
SCARB2-224ENST00000640880 RTN1Q16799 776 aa10.08□□□□□ -0.8
SCARB2-224ENST00000640880 KLK14Q9P0G3 267 aa10.08□□□□□ -0.8
SCARB2-224ENST00000640880 HRH3Q9Y5N1 445 aa10.08□□□□□ -0.8
SCARB2-224ENST00000640880 ADH1AP07327 375 aa10.07□□□□□ -0.8
SCARB2-224ENST00000640880 ZNF76P36508 570 aa10.07□□□□□ -0.8
SCARB2-224ENST00000640880 L3MBTL2Q969R5 705 aa10.07□□□□□ -0.8
SCARB2-224ENST00000640880 IFT43Q96FT9 208 aa10.07□□□□□ -0.8
SCARB2-224ENST00000640880 PARP3Q9Y6F1 533 aa10.07□□□□□ -0.8
SCARB2-224ENST00000640880 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-224ENST00000640880 ITGBL1O95965 494 aaPredicted RBP10.06□□□□□ -0.8
SCARB2-224ENST00000640880 GNA15P30679 374 aa10.06□□□□□ -0.8
SCARB2-224ENST00000640880 CLN3Q13286 438 aa10.06□□□□□ -0.8
SCARB2-224ENST00000640880 TGIF2Q9GZN2 237 aa10.06□□□□□ -0.8
SCARB2-224ENST00000640880 CCSER2Q9H7U1 834 aa10.06□□□□□ -0.8
SCARB2-224ENST00000640880 PPP1R18Q6NYC8 613 aa10.05□□□□□ -0.8
SCARB2-224ENST00000640880 CSRNP1Q96S65 589 aa10.05□□□□□ -0.8
SCARB2-224ENST00000640880 TINF2Q9BSI4 451 aa10.05□□□□□ -0.8
SCARB2-224ENST00000640880 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
SCARB2-224ENST00000640880 PHACTR1Q9C0D0 580 aa10.05□□□□□ -0.8
SCARB2-224ENST00000640880 FHDC1Q9C0D6 1143 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-224ENST00000640880 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.05□□□□□ -0.8
SCARB2-224ENST00000640880 PCSK2P16519 638 aa10.04□□□□□ -0.8
SCARB2-224ENST00000640880 CENPCQ03188 943 aa10.04□□□□□ -0.8
SCARB2-224ENST00000640880 ZNF295-AS1Q8N0V1 137 aa10.04□□□□□ -0.8
SCARB2-224ENST00000640880 FBF1Q8TES7 1133 aa10.04□□□□□ -0.8
SCARB2-224ENST00000640880 CFHR5Q9BXR6 569 aa10.04□□□□□ -0.8
SCARB2-224ENST00000640880 MEN1O00255 615 aa10.03□□□□□ -0.8
SCARB2-224ENST00000640880 SMARCA5O60264 1052 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-224ENST00000640880 CBLBQ13191 982 aa10.03□□□□□ -0.8
SCARB2-224ENST00000640880 ORC1Q13415 861 aa10.03□□□□□ -0.8
SCARB2-224ENST00000640880 LIAT1Q6ZQX7 453 aa10.03□□□□□ -0.8
SCARB2-224ENST00000640880 KDF1Q8NAX2 398 aaPredicted RBP10.03□□□□□ -0.8
SCARB2-224ENST00000640880 GPR152Q8TDT2 470 aa10.03□□□□□ -0.8
SCARB2-224ENST00000640880 MRGPRX2Q96LB1 330 aa10.03□□□□□ -0.8
SCARB2-224ENST00000640880 CAPN10Q9HC96 672 aa10.03□□□□□ -0.8
SCARB2-224ENST00000640880 TOP2AP11388 1531 aaKnown RBP10.02□□□□□ -0.8
SCARB2-224ENST00000640880 WNT7AO00755 349 aa10.02□□□□□ -0.81
SCARB2-224ENST00000640880 TREML1Q86YW5 311 aa10.02□□□□□ -0.81
SCARB2-224ENST00000640880 NUDT16Q96DE0 195 aaKnown RBP10.02□□□□□ -0.81
SCARB2-224ENST00000640880 NLRP3Q96P20 1036 aa10.02□□□□□ -0.81
SCARB2-224ENST00000640880 EIF1AYO14602 144 aaKnown RBP10.01□□□□□ -0.81
SCARB2-224ENST00000640880 C8orf34Q49A92 452 aa10.01□□□□□ -0.81
SCARB2-224ENST00000640880 PPARGC1BQ86YN6 1023 aaKnown RBP10.01□□□□□ -0.81
SCARB2-224ENST00000640880 CRELD1Q96HD1 420 aa10.01□□□□□ -0.81
SCARB2-224ENST00000640880 NIFKQ9BYG3 293 aaKnown RBP10.01□□□□□ -0.81
SCARB2-224ENST00000640880 ACBD3Q9H3P7 528 aa10.01□□□□□ -0.81
SCARB2-224ENST00000640880 HCSTQ9UBK5 93 aa10.01□□□□□ -0.81
SCARB2-224ENST00000640880 PTGIRP43119 386 aa10□□□□□ -0.81
SCARB2-224ENST00000640880 NNTQ13423 1086 aa10□□□□□ -0.81
SCARB2-224ENST00000640880 TTC16Q8NEE8 873 aa10□□□□□ -0.81
SCARB2-224ENST00000640880 SPATA32Q96LK8 384 aa10□□□□□ -0.81
SCARB2-224ENST00000640880 ZSCAN10Q96SZ4 725 aaPredicted RBP10□□□□□ -0.81
SCARB2-224ENST00000640880 AK5Q9Y6K8 562 aa10□□□□□ -0.81
SCARB2-224ENST00000640880 A6NHS1 94 aa9.99□□□□□ -0.81
SCARB2-224ENST00000640880 TMEM214Q6NUQ4 689 aaKnown RBP9.99□□□□□ -0.81
SCARB2-224ENST00000640880 SLC43A3Q8NBI5 491 aa9.99□□□□□ -0.81
SCARB2-224ENST00000640880 AGBL1Q96MI9 1066 aa9.99□□□□□ -0.81
SCARB2-224ENST00000640880 FRMD6Q96NE9 622 aa9.99□□□□□ -0.81
SCARB2-224ENST00000640880 GGNBP2Q9H3C7 697 aa9.99□□□□□ -0.81
SCARB2-224ENST00000640880 PRKAG2Q9UGJ0 569 aa9.99□□□□□ -0.81
SCARB2-224ENST00000640880 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.99□□□□□ -0.81
SCARB2-224ENST00000640880 ALDH1A1P00352 501 aa9.98□□□□□ -0.81
SCARB2-224ENST00000640880 NEFLP07196 543 aa9.98□□□□□ -0.81
SCARB2-224ENST00000640880 CTSHP09668 335 aa9.98□□□□□ -0.81
SCARB2-224ENST00000640880 GTF2E1P29083 439 aaPredicted RBP9.98□□□□□ -0.81
SCARB2-224ENST00000640880 TNNI2P48788 182 aa9.98□□□□□ -0.81
SCARB2-224ENST00000640880 C1orf53Q5VUE5 145 aa9.98□□□□□ -0.81
SCARB2-224ENST00000640880 EMID1Q96A84 441 aaPredicted RBP9.98□□□□□ -0.81
SCARB2-224ENST00000640880 DNAJC25Q9H1X3 360 aa9.98□□□□□ -0.81
SCARB2-224ENST00000640880 FAM13BQ9NYF5 915 aa9.98□□□□□ -0.81
SCARB2-224ENST00000640880 SPG7Q9UQ90 795 aa9.98□□□□□ -0.81
SCARB2-224ENST00000640880 OPLAHO14841 1288 aa9.97□□□□□ -0.81
SCARB2-224ENST00000640880 CDK11BP21127 795 aaKnown RBP9.97□□□□□ -0.81
SCARB2-224ENST00000640880 CANXP27824 592 aaKnown RBP9.97□□□□□ -0.81
SCARB2-224ENST00000640880 TXLNAP40222 546 aa9.97□□□□□ -0.81
SCARB2-224ENST00000640880 RELBQ01201 579 aa9.97□□□□□ -0.81
SCARB2-224ENST00000640880 GNL2Q13823 731 aaKnown RBP9.97□□□□□ -0.81
SCARB2-224ENST00000640880 Q6ZVU0 165 aa9.97□□□□□ -0.81
SCARB2-224ENST00000640880 DPH6Q7L8W6 267 aa9.97□□□□□ -0.81
SCARB2-224ENST00000640880 RHBDD1Q8TEB9 315 aa9.97□□□□□ -0.81
SCARB2-224ENST00000640880 DNAJC2Q99543 621 aaKnown RBP9.97□□□□□ -0.81
SCARB2-224ENST00000640880 PLA2G2EQ9NZK7 142 aa9.97□□□□□ -0.81
SCARB2-224ENST00000640880 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
SCARB2-224ENST00000640880 BCS1LQ9Y276 419 aa9.97□□□□□ -0.81
SCARB2-224ENST00000640880 WASF2Q9Y6W5 498 aa9.97□□□□□ -0.81
SCARB2-224ENST00000640880 RPLP1P05386 114 aaKnown RBP9.96□□□□□ -0.82
SCARB2-224ENST00000640880 EIF4BP23588 611 aaKnown RBP9.96□□□□□ -0.82
SCARB2-224ENST00000640880 ITPKCQ96DU7 683 aa9.96□□□□□ -0.82
SCARB2-224ENST00000640880 NLRP2Q9NX02 1062 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms