RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
NECAP1-216ENST00000639167 GRM8O00222 908 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 GLRX3O76003 335 aaKnown RBP12.84□□□□□ -0.35
NECAP1-216ENST00000639167 NFATC2IPQ8NCF5 419 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 LINS1Q8NG48 757 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 GPT2Q8TD30 523 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 KAZALD1Q96I82 304 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 BICC1Q9H694 974 aaKnown RBP12.84□□□□□ -0.35
NECAP1-216ENST00000639167 SNX14Q9Y5W7 946 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.84□□□□□ -0.35
NECAP1-216ENST00000639167 CAMTA1Q9Y6Y1 1673 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 TTC41PQ6P2S7 1318 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 DDX58O95786 925 aaKnown RBP12.84□□□□□ -0.35
NECAP1-216ENST00000639167 IFIT2P09913 472 aaKnown RBP12.84□□□□□ -0.35
NECAP1-216ENST00000639167 PIP4K2AP48426 406 aaPredicted RBP12.84□□□□□ -0.35
NECAP1-216ENST00000639167 ZNF790Q6PG37 636 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 AACSQ86V21 672 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 IL17RAQ96F46 866 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 LARP6Q9BRS8 491 aaKnown RBP12.84□□□□□ -0.35
NECAP1-216ENST00000639167 DIAPH3Q9NSV4 1193 aa12.84□□□□□ -0.35
NECAP1-216ENST00000639167 NPHP3Q7Z494 1330 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 USP42Q9H9J4 1324 aaKnown RBP12.83□□□□□ -0.36
NECAP1-216ENST00000639167 BRD1O95696 1058 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 CSB-PGBD3P0DP91 1061 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.36
NECAP1-216ENST00000639167 ZSCAN23Q3MJ62 389 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 FOXD4L6Q3SYB3 417 aaPredicted RBP12.83□□□□□ -0.36
NECAP1-216ENST00000639167 FOXD4L3Q6VB84 417 aaPredicted RBP12.83□□□□□ -0.36
NECAP1-216ENST00000639167 KIAA1211Q6ZU35 1233 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 SLC52A2Q9HAB3 445 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 ECHDC1Q9NTX5 307 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 NSFL1CQ9UNZ2 370 aaKnown RBP12.83□□□□□ -0.36
NECAP1-216ENST00000639167 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
NECAP1-216ENST00000639167 IGKV5-2P06315 115 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 CPA1P15085 419 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 PHKG2P15735 406 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 INTS4Q96HW7 963 aaKnown RBP12.83□□□□□ -0.36
NECAP1-216ENST00000639167 SIL1Q9H173 461 aa12.83□□□□□ -0.36
NECAP1-216ENST00000639167 SIPA1L3O60292 1781 aaPredicted RBP12.83□□□□□ -0.36
NECAP1-216ENST00000639167 SASH1O94885 1247 aa12.82□□□□□ -0.36
NECAP1-216ENST00000639167 ATF3P18847 181 aa12.82□□□□□ -0.36
NECAP1-216ENST00000639167 KLHDC4Q8TBB5 520 aa12.82□□□□□ -0.36
NECAP1-216ENST00000639167 XAGE3Q8WTP9 111 aa12.82□□□□□ -0.36
NECAP1-216ENST00000639167 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
NECAP1-216ENST00000639167 EPB41L2O43491 1005 aaKnown RBP12.81□□□□□ -0.36
NECAP1-216ENST00000639167 NASPP49321 788 aaPredicted RBP12.81□□□□□ -0.36
NECAP1-216ENST00000639167 ZNF445P59923 1031 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 PTH1RQ03431 593 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 G3BP1Q13283 466 aaKnown RBP eCLIP12.81□□□□□ -0.36
NECAP1-216ENST00000639167 ERC1Q8IUD2 1116 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 JARID2Q92833 1246 aaPredicted RBP12.81□□□□□ -0.36
NECAP1-216ENST00000639167 ZNF496Q96IT1 587 aaPredicted RBP12.81□□□□□ -0.36
NECAP1-216ENST00000639167 MYD88Q99836 296 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 MEGF6O75095 1541 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 KIF1AQ12756 1690 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 AK2P54819 239 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 PLCB2Q00722 1185 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 EAF2Q96CJ1 260 aaPredicted RBP12.81□□□□□ -0.36
NECAP1-216ENST00000639167 TLR7Q9NYK1 1049 aaKnown RBP12.81□□□□□ -0.36
NECAP1-216ENST00000639167 HDAC5Q9UQL6 1122 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
NECAP1-216ENST00000639167 LARP1Q6PKG0 1096 aaKnown RBP12.8□□□□□ -0.36
NECAP1-216ENST00000639167 TRIM44Q96DX7 344 aaPredicted RBP12.8□□□□□ -0.36
NECAP1-216ENST00000639167 GPATCH3Q96I76 525 aa12.8□□□□□ -0.36
NECAP1-216ENST00000639167 TMEM63CQ9P1W3 806 aa12.8□□□□□ -0.36
NECAP1-216ENST00000639167 USP16Q9Y5T5 823 aa12.8□□□□□ -0.36
NECAP1-216ENST00000639167 UTYO14607 1347 aa12.8□□□□□ -0.36
NECAP1-216ENST00000639167 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
NECAP1-216ENST00000639167 DTNBO60941 627 aa12.8□□□□□ -0.36
NECAP1-216ENST00000639167 NEXNQ0ZGT2 675 aa12.8□□□□□ -0.36
NECAP1-216ENST00000639167 EPHA10Q5JZY3 1008 aa12.8□□□□□ -0.36
NECAP1-216ENST00000639167 IFNL2Q8IZJ0 200 aa12.8□□□□□ -0.36
NECAP1-216ENST00000639167 DDX54Q8TDD1 881 aaKnown RBP12.8□□□□□ -0.36
NECAP1-216ENST00000639167 TTC14Q96N46 770 aa12.8□□□□□ -0.36
NECAP1-216ENST00000639167 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 C5P01031 1676 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 ADAMTS7Q9UKP4 1686 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 MST1RQ04912 1400 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 CASTP20810 708 aaKnown RBP12.79□□□□□ -0.36
NECAP1-216ENST00000639167 PRPF40BQ6NWY9 871 aaKnown RBP12.79□□□□□ -0.36
NECAP1-216ENST00000639167 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 GDPD2Q9HCC8 539 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 CRYBG1Q9Y4K1 1723 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 CYP27B1O15528 508 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 PRIM1P49642 420 aaKnown RBP12.79□□□□□ -0.36
NECAP1-216ENST00000639167 RUFY3Q7L099 469 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 EVI5LQ96CN4 794 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 RBSNQ9H1K0 784 aa12.79□□□□□ -0.36
NECAP1-216ENST00000639167 GCKRQ14397 625 aa12.78□□□□□ -0.36
NECAP1-216ENST00000639167 ADCK5Q3MIX3 580 aa12.78□□□□□ -0.36
NECAP1-216ENST00000639167 TTC5Q8N0Z6 440 aa12.78□□□□□ -0.36
NECAP1-216ENST00000639167 FAM227BQ96M60 508 aa12.78□□□□□ -0.36
NECAP1-216ENST00000639167 BOLA2Q9H3K6 86 aa12.78□□□□□ -0.36
NECAP1-216ENST00000639167 SYCE3A1L190 88 aa12.77□□□□□ -0.36
NECAP1-216ENST00000639167 LARGE1O95461 756 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms