RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 WEE1P30291 646 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 TXLNAP40222 546 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 SRPK2P78362 688 aaKnown RBP6.63□□□□□ -1.35
SRP54-214ENST00000630962 NEUROD1Q13562 356 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 RTN1Q16799 776 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 TBCELQ5QJ74 424 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 ALDH16A1Q8IZ83 802 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 SVOPQ8N4V2 548 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 GOLGA6L1Q8N7Z2 621 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 PHACTR1Q9C0D0 580 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 EFCC1Q9HA90 598 aa6.63□□□□□ -1.35
SRP54-214ENST00000630962 C21orf2O43822 256 aa6.62□□□□□ -1.35
SRP54-214ENST00000630962 BCRP11274 1271 aa6.62□□□□□ -1.35
SRP54-214ENST00000630962 TNP2Q05952 138 aa6.62□□□□□ -1.35
SRP54-214ENST00000630962 IER5Q5VY09 327 aa6.62□□□□□ -1.35
SRP54-214ENST00000630962 CCDC82Q8N4S0 544 aa6.62□□□□□ -1.35
SRP54-214ENST00000630962 CHMP7Q8WUX9 453 aaPredicted RBP6.62□□□□□ -1.35
SRP54-214ENST00000630962 ABHD17AQ96GS6 310 aa6.62□□□□□ -1.35
SRP54-214ENST00000630962 OXCT2Q9BYC2 517 aaPredicted RBP6.62□□□□□ -1.35
SRP54-214ENST00000630962 MARK1Q9P0L2 795 aa6.62□□□□□ -1.35
SRP54-214ENST00000630962 HCN4Q9Y3Q4 1203 aa6.62□□□□□ -1.35
SRP54-214ENST00000630962 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.61□□□□□ -1.35
SRP54-214ENST00000630962 ARID3CA6NKF2 412 aa6.61□□□□□ -1.35
SRP54-214ENST00000630962 KHNYNO15037 678 aaKnown RBP6.61□□□□□ -1.35
SRP54-214ENST00000630962 THBS1P07996 1170 aa6.61□□□□□ -1.35
SRP54-214ENST00000630962 ARAFP10398 606 aa6.61□□□□□ -1.35
SRP54-214ENST00000630962 MAPTP10636 758 aaKnown RBP6.61□□□□□ -1.35
SRP54-214ENST00000630962 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
SRP54-214ENST00000630962 CDCA8Q53HL2 280 aa6.61□□□□□ -1.35
SRP54-214ENST00000630962 COL26A1Q96A83 441 aa6.61□□□□□ -1.35
SRP54-214ENST00000630962 PIK3R2O00459 728 aa6.6□□□□□ -1.35
SRP54-214ENST00000630962 PTCD1O75127 700 aaKnown RBP6.6□□□□□ -1.35
SRP54-214ENST00000630962 EPB42P16452 691 aa6.6□□□□□ -1.35
SRP54-214ENST00000630962 PDE4CQ08493 712 aa6.6□□□□□ -1.35
SRP54-214ENST00000630962 ZNF385CQ66K41 422 aaPredicted RBP6.6□□□□□ -1.35
SRP54-214ENST00000630962 LRRC69Q6ZNQ3 347 aa6.6□□□□□ -1.35
SRP54-214ENST00000630962 C7orf43Q8WVR3 580 aa6.6□□□□□ -1.35
SRP54-214ENST00000630962 C11orf16Q9NQ32 467 aa6.6□□□□□ -1.35
SRP54-214ENST00000630962 EFSO43281 561 aa6.59□□□□□ -1.35
SRP54-214ENST00000630962 CELA2BP08218 269 aaPredicted RBP6.59□□□□□ -1.35
SRP54-214ENST00000630962 CLP1Q92989 425 aaKnown RBP6.59□□□□□ -1.35
SRP54-214ENST00000630962 KLRG1Q96E93 195 aa6.59□□□□□ -1.35
SRP54-214ENST00000630962 SCARF2Q96GP6 870 aaPredicted RBP6.59□□□□□ -1.35
SRP54-214ENST00000630962 MYO19Q96H55 970 aa6.59□□□□□ -1.35
SRP54-214ENST00000630962 SUSD3Q96L08 255 aa6.59□□□□□ -1.35
SRP54-214ENST00000630962 PRR12Q9ULL5 1215 aa6.59□□□□□ -1.35
SRP54-214ENST00000630962 TGFBR3LH3BV60 316 aa6.58□□□□□ -1.36
SRP54-214ENST00000630962 OIP5O43482 229 aa6.58□□□□□ -1.36
SRP54-214ENST00000630962 ADH6P28332 368 aa6.58□□□□□ -1.36
SRP54-214ENST00000630962 MARSP56192 900 aaKnown RBP6.58□□□□□ -1.36
SRP54-214ENST00000630962 KCNQ4P56696 695 aa6.58□□□□□ -1.36
SRP54-214ENST00000630962 SLCO4C1Q6ZQN7 724 aa6.58□□□□□ -1.36
SRP54-214ENST00000630962 NGLY1Q96IV0 654 aa6.58□□□□□ -1.36
SRP54-214ENST00000630962 CEP63Q96MT8 703 aa6.58□□□□□ -1.36
SRP54-214ENST00000630962 ZMIZ1Q9ULJ6 1067 aa6.58□□□□□ -1.36
SRP54-214ENST00000630962 DCDC2BA2VCK2 349 aa6.57□□□□□ -1.36
SRP54-214ENST00000630962 ARHGEF15O94989 841 aa6.57□□□□□ -1.36
SRP54-214ENST00000630962 C11orf91Q3C1V1 193 aa6.57□□□□□ -1.36
SRP54-214ENST00000630962 SH3PXD2AQ5TCZ1 1133 aa6.57□□□□□ -1.36
SRP54-214ENST00000630962 LYPD4Q6UWN0 246 aa6.57□□□□□ -1.36
SRP54-214ENST00000630962 PODNQ7Z5L7 613 aa6.57□□□□□ -1.36
SRP54-214ENST00000630962 NEDD1Q8NHV4 660 aa6.57□□□□□ -1.36
SRP54-214ENST00000630962 ACDQ96AP0 544 aa6.57□□□□□ -1.36
SRP54-214ENST00000630962 ADAMTS8Q9UP79 889 aa6.57□□□□□ -1.36
SRP54-214ENST00000630962 PHF20L1A8MW92 1017 aa6.56□□□□□ -1.36
SRP54-214ENST00000630962 CTBSQ01459 385 aa6.56□□□□□ -1.36
SRP54-214ENST00000630962 ZNF468Q5VIY5 522 aaPredicted RBP6.56□□□□□ -1.36
SRP54-214ENST00000630962 BTLAQ7Z6A9 289 aa6.56□□□□□ -1.36
SRP54-214ENST00000630962 BRD7Q9NPI1 651 aa6.56□□□□□ -1.36
SRP54-214ENST00000630962 KCNH4Q9UQ05 1017 aa6.56□□□□□ -1.36
SRP54-214ENST00000630962 CD33P20138 364 aa6.55□□□□□ -1.36
SRP54-214ENST00000630962 ALAS2P22557 587 aa6.55□□□□□ -1.36
SRP54-214ENST00000630962 TYRO3Q06418 890 aa6.55□□□□□ -1.36
SRP54-214ENST00000630962 FAM69CQ0P6D2 419 aa6.55□□□□□ -1.36
SRP54-214ENST00000630962 TMEM164Q5U3C3 297 aa6.55□□□□□ -1.36
SRP54-214ENST00000630962 B4GALNT3Q6L9W6 998 aa6.55□□□□□ -1.36
SRP54-214ENST00000630962 BEND7Q8N7W2 519 aaPredicted RBP6.55□□□□□ -1.36
SRP54-214ENST00000630962 GALNT6Q8NCL4 622 aa6.55□□□□□ -1.36
SRP54-214ENST00000630962 STK32AQ8WU08 396 aa6.55□□□□□ -1.36
SRP54-214ENST00000630962 FAM13BQ9NYF5 915 aa6.55□□□□□ -1.36
SRP54-214ENST00000630962 CXXC1Q9P0U4 656 aaPredicted RBP6.55□□□□□ -1.36
SRP54-214ENST00000630962 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
SRP54-214ENST00000630962 PRMT3O60678 531 aa6.54□□□□□ -1.36
SRP54-214ENST00000630962 SIN3BO75182 1162 aa6.54□□□□□ -1.36
SRP54-214ENST00000630962 OCLNQ16625 522 aa6.54□□□□□ -1.36
SRP54-214ENST00000630962 KANK3Q6NY19 840 aa6.54□□□□□ -1.36
SRP54-214ENST00000630962 EDARADDQ8WWZ3 215 aa6.54□□□□□ -1.36
SRP54-214ENST00000630962 GGA1Q9UJY5 639 aa6.54□□□□□ -1.36
SRP54-214ENST00000630962 DNMT3AQ9Y6K1 912 aaPredicted RBP6.54□□□□□ -1.36
SRP54-214ENST00000630962 C2CD2LO14523 706 aa6.53□□□□□ -1.36
SRP54-214ENST00000630962 BRD2P25440 801 aaKnown RBP6.53□□□□□ -1.36
SRP54-214ENST00000630962 PCSK7Q16549 785 aa6.53□□□□□ -1.36
SRP54-214ENST00000630962 C16orf46Q6P387 395 aa6.53□□□□□ -1.36
SRP54-214ENST00000630962 ALYREFQ86V81 257 aaKnown RBP6.53□□□□□ -1.36
SRP54-214ENST00000630962 WHAMMQ8TF30 809 aa6.53□□□□□ -1.36
SRP54-214ENST00000630962 PRIMPOLQ96LW4 560 aa6.53□□□□□ -1.36
SRP54-214ENST00000630962 USTQ9Y2C2 406 aa6.53□□□□□ -1.36
SRP54-214ENST00000630962 EPXP11678 715 aa6.52□□□□□ -1.37
SRP54-214ENST00000630962 AMPD1P23109 780 aa6.52□□□□□ -1.37
SRP54-214ENST00000630962 ARID4AP29374 1257 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms