RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 RIPK4P57078 832 aa27.69■■■□□ 2.02
PMPCA-212ENST00000622209 NBPF26B4DH59 902 aa27.68■■■□□ 2.02
PMPCA-212ENST00000622209 NBPF10Q6P3W6 841 aaKnown RBP27.68■■■□□ 2.02
PMPCA-212ENST00000622209 NBPF15Q8N660 670 aa27.68■■■□□ 2.02
PMPCA-212ENST00000622209 PDZRN3Q9UPQ7 1066 aa27.68■■■□□ 2.02
PMPCA-212ENST00000622209 NFKBIEO00221 500 aa27.67■■■□□ 2.02
PMPCA-212ENST00000622209 C21orf2O43822 256 aa27.67■■■□□ 2.02
PMPCA-212ENST00000622209 APLP1P51693 650 aa27.67■■■□□ 2.02
PMPCA-212ENST00000622209 ST5P78524 1137 aa27.67■■■□□ 2.02
PMPCA-212ENST00000622209 RBM46Q8TBY0 533 aaKnown RBP27.67■■■□□ 2.02
PMPCA-212ENST00000622209 DLG5Q8TDM6 1919 aa27.67■■■□□ 2.02
PMPCA-212ENST00000622209 LMOD3Q0VAK6 560 aa27.66■■■□□ 2.02
PMPCA-212ENST00000622209 CLEC4GQ6UXB4 293 aa27.65■■■□□ 2.02
PMPCA-212ENST00000622209 NBPF5PQ86XG9 351 aaPredicted RBP27.65■■■□□ 2.02
PMPCA-212ENST00000622209 ZNF652Q9Y2D9 606 aa27.64■■■□□ 2.02
PMPCA-212ENST00000622209 SCN7AQ01118 1682 aa27.64■■■□□ 2.02
PMPCA-212ENST00000622209 THUMPD2Q9BTF0 503 aaKnown RBP27.63■■■□□ 2.01
PMPCA-212ENST00000622209 ZC3H4Q9UPT8 1303 aaKnown RBP27.62■■■□□ 2.01
PMPCA-212ENST00000622209 GLTPD2A6NH11 291 aa27.61■■■□□ 2.01
PMPCA-212ENST00000622209 FAM177BA6PVY3 158 aa27.61■■■□□ 2.01
PMPCA-212ENST00000622209 SRGNP10124 158 aa27.61■■■□□ 2.01
PMPCA-212ENST00000622209 NEUROD2Q15784 382 aa27.61■■■□□ 2.01
PMPCA-212ENST00000622209 STYK1Q6J9G0 422 aa27.61■■■□□ 2.01
PMPCA-212ENST00000622209 NGEFQ8N5V2 710 aa27.61■■■□□ 2.01
PMPCA-212ENST00000622209 CNKSR1Q969H4 720 aa27.61■■■□□ 2.01
PMPCA-212ENST00000622209 NIP7Q9Y221 180 aaKnown RBP eCLIP27.61■■■□□ 2.01
PMPCA-212ENST00000622209 RRP7AQ9Y3A4 280 aaKnown RBP27.61■■■□□ 2.01
PMPCA-212ENST00000622209 FSTL1Q12841 308 aa27.59■■■□□ 2.01
PMPCA-212ENST00000622209 HLFQ16534 295 aa27.59■■■□□ 2.01
PMPCA-212ENST00000622209 MASTLQ96GX5 879 aa27.59■■■□□ 2.01
PMPCA-212ENST00000622209 APAF1O14727 1248 aa27.58■■■□□ 2.01
PMPCA-212ENST00000622209 PRPF40BQ6NWY9 871 aaKnown RBP27.58■■■□□ 2.01
PMPCA-212ENST00000622209 TPTE2Q6XPS3 522 aa27.58■■■□□ 2.01
PMPCA-212ENST00000622209 EIF4A1P60842 406 aaKnown RBP27.57■■■□□ 2
PMPCA-212ENST00000622209 HTRA3P83110 453 aa27.57■■■□□ 2
PMPCA-212ENST00000622209 DNAJC5GQ8N7S2 189 aa27.57■■■□□ 2
PMPCA-212ENST00000622209 TRIM35Q9UPQ4 493 aa27.57■■■□□ 2
PMPCA-212ENST00000622209 DLEC1Q9Y238 1755 aa27.57■■■□□ 2
PMPCA-212ENST00000622209 ANKRD31Q8N7Z5 1873 aa27.57■■■□□ 2
PMPCA-212ENST00000622209 SBF1O95248 1867 aa27.56■■■□□ 2
PMPCA-212ENST00000622209 VEGFAP15692 232 aaPredicted RBP27.56■■■□□ 2
PMPCA-212ENST00000622209 ERFEQ4G0M1 354 aa27.56■■■□□ 2
PMPCA-212ENST00000622209 DIEXFQ68CQ4 756 aaKnown RBP27.56■■■□□ 2
PMPCA-212ENST00000622209 TAOK3Q9H2K8 898 aa27.54■■■□□ 2
PMPCA-212ENST00000622209 BABAM1Q9NWV8 329 aa27.54■■■□□ 2
PMPCA-212ENST00000622209 RGL2O15211 777 aa27.53■■■□□ 2
PMPCA-212ENST00000622209 MYL6BP14649 208 aa27.53■■■□□ 2
PMPCA-212ENST00000622209 DPY19L2Q6NUT2 758 aa27.53■■■□□ 2
PMPCA-212ENST00000622209 SMC1BQ8NDV3 1235 aa27.53■■■□□ 2
PMPCA-212ENST00000622209 CCER2I3L3R5 266 aa27.52■■■□□ 2
PMPCA-212ENST00000622209 NPR1P16066 1061 aa27.52■■■□□ 2
PMPCA-212ENST00000622209 GTF2E1P29083 439 aaPredicted RBP27.52■■■□□ 2
PMPCA-212ENST00000622209 COL11A2P13942 1736 aaPredicted RBP27.51■■□□□ 1.99
PMPCA-212ENST00000622209 SOGA3Q5TF21 947 aa27.51■■□□□ 1.99
PMPCA-212ENST00000622209 TTLL7Q6ZT98 887 aa27.51■■□□□ 1.99
PMPCA-212ENST00000622209 BCORQ6W2J9 1755 aa27.5■■□□□ 1.99
PMPCA-212ENST00000622209 LTBP3Q9NS15 1303 aa27.5■■□□□ 1.99
PMPCA-212ENST00000622209 KLRG2A4D1S0 409 aaPredicted RBP27.5■■□□□ 1.99
PMPCA-212ENST00000622209 FAM9BQ8IZU0 186 aa27.5■■□□□ 1.99
PMPCA-212ENST00000622209 C7orf43Q8WVR3 580 aa27.5■■□□□ 1.99
PMPCA-212ENST00000622209 POTECB2RU33 542 aa27.49■■□□□ 1.99
PMPCA-212ENST00000622209 NCBP3Q53F19 620 aaKnown RBP27.49■■□□□ 1.99
PMPCA-212ENST00000622209 TSPYL4Q9UJ04 414 aa27.49■■□□□ 1.99
PMPCA-212ENST00000622209 ERVV-1B6SEH8 477 aa27.48■■□□□ 1.99
PMPCA-212ENST00000622209 KIF6Q6ZMV9 814 aa27.48■■□□□ 1.99
PMPCA-212ENST00000622209 MAP3K15Q6ZN16 1313 aa27.47■■□□□ 1.99
PMPCA-212ENST00000622209 CCDC93Q567U6 631 aa27.47■■□□□ 1.99
PMPCA-212ENST00000622209 OLFM4Q6UX06 510 aa27.47■■□□□ 1.99
PMPCA-212ENST00000622209 ZBTB3Q9H5J0 574 aa27.47■■□□□ 1.99
PMPCA-212ENST00000622209 KDM3BQ7LBC6 1761 aa27.46■■□□□ 1.99
PMPCA-212ENST00000622209 GPTP24298 496 aa27.46■■□□□ 1.99
PMPCA-212ENST00000622209 CALD1Q05682 793 aaKnown RBP27.46■■□□□ 1.99
PMPCA-212ENST00000622209 NUTM1Q86Y26 1132 aa27.46■■□□□ 1.99
PMPCA-212ENST00000622209 TNRC6CQ9HCJ0 1690 aaKnown RBP27.46■■□□□ 1.99
PMPCA-212ENST00000622209 DDNO94850 711 aaPredicted RBP27.45■■□□□ 1.98
PMPCA-212ENST00000622209 CCDC27Q2M243 656 aa27.45■■□□□ 1.98
PMPCA-212ENST00000622209 SLX4Q8IY92 1834 aa27.45■■□□□ 1.98
PMPCA-212ENST00000622209 CHL1O00533 1208 aa27.44■■□□□ 1.98
PMPCA-212ENST00000622209 NYXQ9GZU5 481 aa27.44■■□□□ 1.98
PMPCA-212ENST00000622209 EIF2S2P20042 333 aaKnown RBP27.43■■□□□ 1.98
PMPCA-212ENST00000622209 KLRG1Q96E93 195 aa27.43■■□□□ 1.98
PMPCA-212ENST00000622209 ALDH1B1P30837 517 aa27.42■■□□□ 1.98
PMPCA-212ENST00000622209 IFFO2Q5TF58 517 aa27.42■■□□□ 1.98
PMPCA-212ENST00000622209 CFAP44Q96MT7 982 aa27.42■■□□□ 1.98
PMPCA-212ENST00000622209 ZNF277Q9NRM2 450 aaPredicted RBP27.42■■□□□ 1.98
PMPCA-212ENST00000622209 FKBP4Q02790 459 aaKnown RBP eCLIP27.41■■□□□ 1.98
PMPCA-212ENST00000622209 LAS1LQ9Y4W2 734 aaKnown RBP27.41■■□□□ 1.98
PMPCA-212ENST00000622209 TIAM2Q8IVF5 1701 aa27.41■■□□□ 1.98
PMPCA-212ENST00000622209 ABCC12Q96J65 1359 aa27.4■■□□□ 1.98
PMPCA-212ENST00000622209 SUSD4Q5VX71 490 aa27.4■■□□□ 1.98
PMPCA-212ENST00000622209 UBN2Q6ZU65 1347 aa27.4■■□□□ 1.98
PMPCA-212ENST00000622209 FER1L6Q2WGJ9 1857 aa27.39■■□□□ 1.98
PMPCA-212ENST00000622209 RTKN2Q8IZC4 609 aa27.39■■□□□ 1.98
PMPCA-212ENST00000622209 ANXA1P04083 346 aa27.38■■□□□ 1.97
PMPCA-212ENST00000622209 ZNF853P0CG23 659 aa27.38■■□□□ 1.97
PMPCA-212ENST00000622209 PDIA6Q15084 440 aa27.38■■□□□ 1.97
PMPCA-212ENST00000622209 CRY2Q49AN0 593 aa27.38■■□□□ 1.97
PMPCA-212ENST00000622209 WWC1Q8IX03 1113 aa27.38■■□□□ 1.97
PMPCA-212ENST00000622209 ZNF34Q8IZ26 560 aa27.38■■□□□ 1.97
PMPCA-212ENST00000622209 MIER1Q8N108 512 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms