RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 BAG3O95817 575 aa10.89□□□□□ -0.67
GGA3-223ENST00000621870 A1BGP04217 495 aa10.89□□□□□ -0.67
GGA3-223ENST00000621870 IL27Q8NEV9 243 aa10.89□□□□□ -0.67
GGA3-223ENST00000621870 ZNF592Q92610 1267 aa10.89□□□□□ -0.67
GGA3-223ENST00000621870 POLR3AO14802 1390 aaPredicted RBP10.89□□□□□ -0.67
GGA3-223ENST00000621870 A0A0U1RQG5 324 aaPredicted RBP10.89□□□□□ -0.67
GGA3-223ENST00000621870 IRS4O14654 1257 aaPredicted RBP10.89□□□□□ -0.67
GGA3-223ENST00000621870 ALDH1L1O75891 902 aa10.89□□□□□ -0.67
GGA3-223ENST00000621870 IBSPP21815 317 aaPredicted RBP10.89□□□□□ -0.67
GGA3-223ENST00000621870 KRT85P78386 507 aa10.89□□□□□ -0.67
GGA3-223ENST00000621870 OGFOD1Q8N543 542 aa10.89□□□□□ -0.67
GGA3-223ENST00000621870 PARP3Q9Y6F1 533 aa10.89□□□□□ -0.67
GGA3-223ENST00000621870 PLEKHG3A1L390 1219 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 IFIT3O14879 490 aaKnown RBP10.88□□□□□ -0.67
GGA3-223ENST00000621870 TRAPPC3LQ5T215 181 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 CCDC83Q8IWF9 413 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 FAM89AQ96GI7 184 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 RSPH6AQ9H0K4 717 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 BRPF1P55201 1214 aaPredicted RBP10.88□□□□□ -0.67
GGA3-223ENST00000621870 CDCA7Q9BWT1 371 aaPredicted RBP10.88□□□□□ -0.67
GGA3-223ENST00000621870 DDX21Q9NR30 783 aaKnown RBP eCLIP10.88□□□□□ -0.67
GGA3-223ENST00000621870 NOL7Q9UMY1 257 aaKnown RBP10.88□□□□□ -0.67
GGA3-223ENST00000621870 TNNQ9UQP3 1299 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 WDR33Q9C0J8 1336 aaKnown RBP10.88□□□□□ -0.67
GGA3-223ENST00000621870 PPFIA3O75145 1194 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 GRM1Q13255 1194 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 HOMER1Q86YM7 354 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 CCDC24Q8N4L8 307 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 ARHGAP45Q92619 1136 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 STX8Q9UNK0 236 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 PLEKHH1Q9ULM0 1364 aa10.88□□□□□ -0.67
GGA3-223ENST00000621870 CT47A1Q5JQC4 288 aaPredicted RBP10.87□□□□□ -0.67
GGA3-223ENST00000621870 DNAJC10Q8IXB1 793 aa10.87□□□□□ -0.67
GGA3-223ENST00000621870 ZSCAN31Q96LW9 406 aaPredicted RBP10.87□□□□□ -0.67
GGA3-223ENST00000621870 TSPY2A6NKD2 308 aa10.87□□□□□ -0.67
GGA3-223ENST00000621870 MYCNP04198 464 aaPredicted RBP10.87□□□□□ -0.67
GGA3-223ENST00000621870 ZFYVE16Q7Z3T8 1539 aa10.87□□□□□ -0.67
GGA3-223ENST00000621870 MBD3O95983 291 aa10.87□□□□□ -0.67
GGA3-223ENST00000621870 NAP1L1P55209 391 aaKnown RBP10.87□□□□□ -0.67
GGA3-223ENST00000621870 EVI5LQ96CN4 794 aa10.87□□□□□ -0.67
GGA3-223ENST00000621870 PCDHB15Q9Y5E8 787 aa10.87□□□□□ -0.67
GGA3-223ENST00000621870 PARD3Q8TEW0 1356 aa10.87□□□□□ -0.67
GGA3-223ENST00000621870 HCLS1P14317 486 aaPredicted RBP10.87□□□□□ -0.67
GGA3-223ENST00000621870 GUCY1B3Q02153 619 aa10.87□□□□□ -0.67
GGA3-223ENST00000621870 TTF1Q15361 905 aaPredicted RBP10.87□□□□□ -0.67
GGA3-223ENST00000621870 RBM26Q5T8P6 1007 aaKnown RBP10.87□□□□□ -0.67
GGA3-223ENST00000621870 PDILTQ8N807 584 aa10.87□□□□□ -0.67
GGA3-223ENST00000621870 RNF41Q9H4P4 317 aaPredicted RBP10.87□□□□□ -0.67
GGA3-223ENST00000621870 SEC63Q9UGP8 760 aaKnown RBP10.87□□□□□ -0.67
GGA3-223ENST00000621870 JAG2Q9Y219 1238 aa10.87□□□□□ -0.67
GGA3-223ENST00000621870 IL13P35225 146 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 ZFYVE27Q5T4F4 411 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 MRPL50Q8N5N7 158 aaKnown RBP10.86□□□□□ -0.67
GGA3-223ENST00000621870 NAT10Q9H0A0 1025 aaKnown RBP10.86□□□□□ -0.67
GGA3-223ENST00000621870 STK32BQ9NY57 414 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 ARHGEF10O15013 1369 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 TRAK2O60296 914 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 CYP7A1P22680 504 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 IL15P40933 162 aaPredicted RBP10.86□□□□□ -0.67
GGA3-223ENST00000621870 SPTY2D1Q68D10 685 aaPredicted RBP10.86□□□□□ -0.67
GGA3-223ENST00000621870 DNAJC5Q9H3Z4 198 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 VAT1LQ9HCJ6 419 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 PODXL2Q9NZ53 605 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 CLEC11AQ9Y240 323 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 SBNO1A3KN83 1393 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 RIMBP2O15034 1052 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 IGHDP01880 384 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 UQCRFS1P1P0C7P4 283 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 CCT2P78371 535 aaKnown RBP10.86□□□□□ -0.67
GGA3-223ENST00000621870 TRMT1LQ7Z2T5 733 aaKnown RBP10.86□□□□□ -0.67
GGA3-223ENST00000621870 RAB11FIP4Q86YS3 637 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 ZNF496Q96IT1 587 aaPredicted RBP10.86□□□□□ -0.67
GGA3-223ENST00000621870 NYXQ9GZU5 481 aa10.86□□□□□ -0.67
GGA3-223ENST00000621870 CCDC196A0A1B0GTZ2 297 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 APBA3O96018 575 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 JDP2Q8WYK2 163 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 EDC4Q6P2E9 1401 aaKnown RBP10.85□□□□□ -0.67
GGA3-223ENST00000621870 MYO1BO43795 1136 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 G2E3Q7L622 706 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 TRIM5Q9C035 493 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 CABP5Q9NP86 173 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 SLC12A7Q9Y666 1083 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 HLA-DOAP06340 250 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 ANKRD44Q8N8A2 993 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 CNBD1Q8NA66 436 aa10.85□□□□□ -0.67
GGA3-223ENST00000621870 ZNF335Q9H4Z2 1342 aaPredicted RBP10.85□□□□□ -0.67
GGA3-223ENST00000621870 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.85□□□□□ -0.67
GGA3-223ENST00000621870 WWC2Q6AWC2 1192 aa10.84□□□□□ -0.67
GGA3-223ENST00000621870 MICU3Q86XE3 530 aa10.84□□□□□ -0.67
GGA3-223ENST00000621870 CCDC144CPQ8IYA2 1237 aa10.84□□□□□ -0.67
GGA3-223ENST00000621870 DHX8Q14562 1220 aaKnown RBP10.84□□□□□ -0.67
GGA3-223ENST00000621870 SLC9C2Q5TAH2 1124 aa10.84□□□□□ -0.67
GGA3-223ENST00000621870 WASF1Q92558 559 aa10.84□□□□□ -0.67
GGA3-223ENST00000621870 METP08581 1390 aa10.84□□□□□ -0.67
GGA3-223ENST00000621870 GOLGA8BA8MQT2 603 aa10.84□□□□□ -0.67
GGA3-223ENST00000621870 SPATA32Q96LK8 384 aa10.84□□□□□ -0.67
GGA3-223ENST00000621870 BMP2KQ9NSY1 1161 aaPredicted RBP10.84□□□□□ -0.67
GGA3-223ENST00000621870 SH3TC1Q8TE82 1336 aa10.84□□□□□ -0.67
GGA3-223ENST00000621870 DNMT1P26358 1616 aaKnown RBP10.83□□□□□ -0.68
GGA3-223ENST00000621870 ATP8B2P98198 1209 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms