RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 AKAP12Q02952 1782 aa17.31■□□□□ 0.36
SYNRG-225ENST00000619541 ELF2Q15723 593 aa17.31■□□□□ 0.36
SYNRG-225ENST00000619541 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
SYNRG-225ENST00000619541 GTF3C6Q969F1 213 aa17.31■□□□□ 0.36
SYNRG-225ENST00000619541 FBXW7Q969H0 707 aa17.31■□□□□ 0.36
SYNRG-225ENST00000619541 CEP170BQ9Y4F5 1589 aaPredicted RBP17.31■□□□□ 0.36
SYNRG-225ENST00000619541 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
SYNRG-225ENST00000619541 FILIP1Q7Z7B0 1213 aa17.31■□□□□ 0.36
SYNRG-225ENST00000619541 ANKLE2Q86XL3 938 aa17.31■□□□□ 0.36
SYNRG-225ENST00000619541 CLIP2Q9UDT6 1046 aa17.31■□□□□ 0.36
SYNRG-225ENST00000619541 MSH6P52701 1360 aa17.3■□□□□ 0.36
SYNRG-225ENST00000619541 EIF4A2Q14240 407 aaKnown RBP17.3■□□□□ 0.36
SYNRG-225ENST00000619541 TNMDQ9H2S6 317 aa17.3■□□□□ 0.36
SYNRG-225ENST00000619541 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
SYNRG-225ENST00000619541 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.3■□□□□ 0.36
SYNRG-225ENST00000619541 ITSN1Q15811 1721 aa17.3■□□□□ 0.36
SYNRG-225ENST00000619541 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
SYNRG-225ENST00000619541 TYRO3Q06418 890 aa17.3■□□□□ 0.36
SYNRG-225ENST00000619541 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
SYNRG-225ENST00000619541 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
SYNRG-225ENST00000619541 CALCOCO1Q9P1Z2 691 aa17.3■□□□□ 0.36
SYNRG-225ENST00000619541 AK2P54819 239 aa17.29■□□□□ 0.36
SYNRG-225ENST00000619541 KMT5BQ4FZB7 885 aa17.29■□□□□ 0.36
SYNRG-225ENST00000619541 SYTL4Q96C24 671 aaPredicted RBP17.29■□□□□ 0.36
SYNRG-225ENST00000619541 TFIP11Q9UBB9 837 aaKnown RBP17.29■□□□□ 0.36
SYNRG-225ENST00000619541 PAXBP1Q9Y5B6 917 aa17.29■□□□□ 0.36
SYNRG-225ENST00000619541 GJB2P29033 226 aa17.29■□□□□ 0.36
SYNRG-225ENST00000619541 ZSCAN25Q6NSZ9 544 aa17.29■□□□□ 0.36
SYNRG-225ENST00000619541 LRRCC1Q9C099 1032 aa17.29■□□□□ 0.36
SYNRG-225ENST00000619541 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
SYNRG-225ENST00000619541 ZNF397Q8NF99 534 aaPredicted RBP17.29■□□□□ 0.36
SYNRG-225ENST00000619541 PTPN14Q15678 1187 aa17.28■□□□□ 0.36
SYNRG-225ENST00000619541 POLR3GO15318 223 aaPredicted RBP17.28■□□□□ 0.36
SYNRG-225ENST00000619541 SULT6B1Q6IMI4 303 aa17.28■□□□□ 0.36
SYNRG-225ENST00000619541 OVOS2A0A0J9YW53 1432 aa17.28■□□□□ 0.36
SYNRG-225ENST00000619541 OVOS2Q6IE36 1432 aa17.28■□□□□ 0.36
SYNRG-225ENST00000619541 GORABQ5T7V8 394 aa17.28■□□□□ 0.36
SYNRG-225ENST00000619541 ZBTB9Q96C00 473 aa17.28■□□□□ 0.36
SYNRG-225ENST00000619541 DNAJC2Q99543 621 aaKnown RBP17.28■□□□□ 0.36
SYNRG-225ENST00000619541 MORC2Q9Y6X9 1032 aaPredicted RBP17.28■□□□□ 0.36
SYNRG-225ENST00000619541 CACTINQ8WUQ7 758 aaKnown RBP17.27■□□□□ 0.36
SYNRG-225ENST00000619541 DIP2AQ14689 1571 aa17.27■□□□□ 0.36
SYNRG-225ENST00000619541 SSH2Q76I76 1423 aa17.27■□□□□ 0.36
SYNRG-225ENST00000619541 LIG1P18858 919 aa17.27■□□□□ 0.36
SYNRG-225ENST00000619541 ANAPC15P60006 121 aa17.27■□□□□ 0.36
SYNRG-225ENST00000619541 ARID5BQ14865 1188 aa17.27■□□□□ 0.36
SYNRG-225ENST00000619541 NECAB1Q8N987 351 aa17.27■□□□□ 0.36
SYNRG-225ENST00000619541 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.36
SYNRG-225ENST00000619541 CBX8Q9HC52 389 aa17.27■□□□□ 0.36
SYNRG-225ENST00000619541 DACT1Q9NYF0 836 aa17.27■□□□□ 0.36
SYNRG-225ENST00000619541 SPG7Q9UQ90 795 aa17.27■□□□□ 0.36
SYNRG-225ENST00000619541 TOPAZ1Q8N9V7 1692 aa17.27■□□□□ 0.35
SYNRG-225ENST00000619541 CASTP20810 708 aaKnown RBP17.27■□□□□ 0.35
SYNRG-225ENST00000619541 BICD2Q8TD16 824 aa17.27■□□□□ 0.35
SYNRG-225ENST00000619541 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.35
SYNRG-225ENST00000619541 DNAJC25Q9H1X3 360 aa17.27■□□□□ 0.35
SYNRG-225ENST00000619541 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
SYNRG-225ENST00000619541 MCM10Q7L590 875 aa17.26■□□□□ 0.35
SYNRG-225ENST00000619541 RTL1A6NKG5 1358 aa17.26■□□□□ 0.35
SYNRG-225ENST00000619541 GOLGA6L19H0YKK7 550 aa17.26■□□□□ 0.35
SYNRG-225ENST00000619541 FBXO38Q6PIJ6 1188 aa17.26■□□□□ 0.35
SYNRG-225ENST00000619541 IL25Q9H293 177 aa17.26■□□□□ 0.35
SYNRG-225ENST00000619541 LIMCH1Q9UPQ0 1083 aa17.26■□□□□ 0.35
SYNRG-225ENST00000619541 RGPD8O14715 1765 aaPredicted RBP17.26■□□□□ 0.35
SYNRG-225ENST00000619541 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
SYNRG-225ENST00000619541 MAP3K19Q56UN5 1328 aa17.25■□□□□ 0.35
SYNRG-225ENST00000619541 TCHHQ07283 1943 aa17.25■□□□□ 0.35
SYNRG-225ENST00000619541 USP27XA6NNY8 438 aa17.25■□□□□ 0.35
SYNRG-225ENST00000619541 PAXIP1Q6ZW49 1069 aaPredicted RBP17.25■□□□□ 0.35
SYNRG-225ENST00000619541 FUCA2Q9BTY2 467 aa17.25■□□□□ 0.35
SYNRG-225ENST00000619541 RPAP1Q9BWH6 1393 aaPredicted RBP17.25■□□□□ 0.35
SYNRG-225ENST00000619541 ZNF165P49910 485 aa17.25■□□□□ 0.35
SYNRG-225ENST00000619541 CWC27Q6UX04 472 aaKnown RBP17.25■□□□□ 0.35
SYNRG-225ENST00000619541 MRVI1Q9Y6F6 885 aa17.25■□□□□ 0.35
SYNRG-225ENST00000619541 NLRP6P59044 892 aa17.24■□□□□ 0.35
SYNRG-225ENST00000619541 TMEM87AQ8NBN3 555 aa17.24■□□□□ 0.35
SYNRG-225ENST00000619541 RGS12O14924 1447 aa17.24■□□□□ 0.35
SYNRG-225ENST00000619541 NRKQ7Z2Y5 1582 aa17.24■□□□□ 0.35
SYNRG-225ENST00000619541 LARGE1O95461 756 aa17.24■□□□□ 0.35
SYNRG-225ENST00000619541 ZNF75DP51815 510 aa17.24■□□□□ 0.35
SYNRG-225ENST00000619541 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
SYNRG-225ENST00000619541 RUFY3Q7L099 469 aa17.23■□□□□ 0.35
SYNRG-225ENST00000619541 XRN1Q8IZH2 1706 aaKnown RBP17.23■□□□□ 0.35
SYNRG-225ENST00000619541 GNAI2P04899 355 aa17.23■□□□□ 0.35
SYNRG-225ENST00000619541 KRT85P78386 507 aa17.23■□□□□ 0.35
SYNRG-225ENST00000619541 SKILP12757 684 aa17.23■□□□□ 0.35
SYNRG-225ENST00000619541 CEBPZQ03701 1054 aaKnown RBP17.23■□□□□ 0.35
SYNRG-225ENST00000619541 CCDC144BQ3MJ40 725 aa17.23■□□□□ 0.35
SYNRG-225ENST00000619541 CCDC144CPQ8IYA2 1237 aa17.23■□□□□ 0.35
SYNRG-225ENST00000619541 RASEFQ8IZ41 740 aa17.23■□□□□ 0.35
SYNRG-225ENST00000619541 G2E3Q7L622 706 aa17.22■□□□□ 0.35
SYNRG-225ENST00000619541 JAKMIP1Q96N16 626 aaKnown RBP17.22■□□□□ 0.35
SYNRG-225ENST00000619541 USP31Q70CQ4 1352 aa17.22■□□□□ 0.35
SYNRG-225ENST00000619541 TTC21AQ8NDW8 1320 aa17.22■□□□□ 0.35
SYNRG-225ENST00000619541 BECN2A8MW95 431 aa17.22■□□□□ 0.35
SYNRG-225ENST00000619541 HNRNPH2P55795 449 aaKnown RBP17.22■□□□□ 0.35
SYNRG-225ENST00000619541 C14orf37Q86TY3 774 aa17.22■□□□□ 0.35
SYNRG-225ENST00000619541 TTC6Q86TZ1 520 aa17.22■□□□□ 0.35
SYNRG-225ENST00000619541 SNX14Q9Y5W7 946 aa17.21■□□□□ 0.35
SYNRG-225ENST00000619541 TMX1Q9H3N1 280 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms