RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 LMTK3Q96Q04 1460 aa24.25■■□□□ 1.47
PCDHA13-203ENST00000617769 SURF6O75683 361 aaKnown RBP24.24■■□□□ 1.47
PCDHA13-203ENST00000617769 IFNL2Q8IZJ0 200 aa24.24■■□□□ 1.47
PCDHA13-203ENST00000617769 UPF3BQ9BZI7 483 aaKnown RBP24.24■■□□□ 1.47
PCDHA13-203ENST00000617769 CUL4AQ13619 759 aa24.23■■□□□ 1.47
PCDHA13-203ENST00000617769 PRDM11Q9NQV5 511 aa24.23■■□□□ 1.47
PCDHA13-203ENST00000617769 OVOS2A0A0G2JMS6 1433 aa24.23■■□□□ 1.47
PCDHA13-203ENST00000617769 N4BP2Q86UW6 1770 aaPredicted RBP24.23■■□□□ 1.47
PCDHA13-203ENST00000617769 PRIM1P49642 420 aaKnown RBP24.23■■□□□ 1.47
PCDHA13-203ENST00000617769 MAP4K4O95819 1239 aaPredicted RBP24.22■■□□□ 1.47
PCDHA13-203ENST00000617769 PDIA6Q15084 440 aa24.22■■□□□ 1.47
PCDHA13-203ENST00000617769 ZNF496Q96IT1 587 aaPredicted RBP24.22■■□□□ 1.47
PCDHA13-203ENST00000617769 NSFL1CQ9UNZ2 370 aaKnown RBP24.22■■□□□ 1.47
PCDHA13-203ENST00000617769 RBSNQ9H1K0 784 aa24.22■■□□□ 1.47
PCDHA13-203ENST00000617769 KSR2Q6VAB6 950 aa24.21■■□□□ 1.47
PCDHA13-203ENST00000617769 CHMP4AQ9BY43 222 aa24.21■■□□□ 1.47
PCDHA13-203ENST00000617769 AOX1Q06278 1338 aa24.21■■□□□ 1.47
PCDHA13-203ENST00000617769 STRCQ7RTU9 1775 aa24.21■■□□□ 1.47
PCDHA13-203ENST00000617769 TMEM63CQ9P1W3 806 aa24.21■■□□□ 1.47
PCDHA13-203ENST00000617769 BRD1O95696 1058 aa24.2■■□□□ 1.46
PCDHA13-203ENST00000617769 C9orf78Q9NZ63 289 aaPredicted RBP24.2■■□□□ 1.46
PCDHA13-203ENST00000617769 POLA2Q14181 598 aa24.19■■□□□ 1.46
PCDHA13-203ENST00000617769 TOM1L2Q6ZVM7 507 aa24.19■■□□□ 1.46
PCDHA13-203ENST00000617769 RHPN1Q8TCX5 695 aa24.19■■□□□ 1.46
PCDHA13-203ENST00000617769 USP16Q9Y5T5 823 aa24.19■■□□□ 1.46
PCDHA13-203ENST00000617769 SIPA1L3O60292 1781 aaPredicted RBP24.19■■□□□ 1.46
PCDHA13-203ENST00000617769 RAB11FIP3O75154 756 aa24.19■■□□□ 1.46
PCDHA13-203ENST00000617769 DDX21Q9NR30 783 aaKnown RBP eCLIP24.19■■□□□ 1.46
PCDHA13-203ENST00000617769 HYPKQ9NX55 129 aa24.19■■□□□ 1.46
PCDHA13-203ENST00000617769 INTS4Q96HW7 963 aaKnown RBP24.18■■□□□ 1.46
PCDHA13-203ENST00000617769 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.18■■□□□ 1.46
PCDHA13-203ENST00000617769 CRYBG1Q9Y4K1 1723 aa24.18■■□□□ 1.46
PCDHA13-203ENST00000617769 PI4K2BQ8TCG2 481 aa24.18■■□□□ 1.46
PCDHA13-203ENST00000617769 DCAF5Q96JK2 942 aa24.18■■□□□ 1.46
PCDHA13-203ENST00000617769 CPDO75976 1380 aa24.17■■□□□ 1.46
PCDHA13-203ENST00000617769 IL17RAQ96F46 866 aa24.16■■□□□ 1.46
PCDHA13-203ENST00000617769 STRN4Q9NRL3 753 aa24.16■■□□□ 1.46
PCDHA13-203ENST00000617769 SYCE3A1L190 88 aa24.16■■□□□ 1.46
PCDHA13-203ENST00000617769 HSPA4P34932 840 aa24.16■■□□□ 1.46
PCDHA13-203ENST00000617769 TTC5Q8N0Z6 440 aa24.16■■□□□ 1.46
PCDHA13-203ENST00000617769 CABP4P57796 275 aa24.15■■□□□ 1.46
PCDHA13-203ENST00000617769 SOS2Q07890 1332 aaPredicted RBP24.15■■□□□ 1.46
PCDHA13-203ENST00000617769 ADAMTS7Q9UKP4 1686 aa24.15■■□□□ 1.46
PCDHA13-203ENST00000617769 RIC3Q7Z5B4 369 aa24.15■■□□□ 1.46
PCDHA13-203ENST00000617769 XAGE3Q8WTP9 111 aa24.15■■□□□ 1.46
PCDHA13-203ENST00000617769 KIF1BPQ96EK5 621 aa24.15■■□□□ 1.46
PCDHA13-203ENST00000617769 COPS6Q7L5N1 327 aa24.14■■□□□ 1.46
PCDHA13-203ENST00000617769 ZSCAN30Q86W11 494 aa24.14■■□□□ 1.46
PCDHA13-203ENST00000617769 PA2G4Q9UQ80 394 aaKnown RBP24.14■■□□□ 1.46
PCDHA13-203ENST00000617769 FOXD4L6Q3SYB3 417 aaPredicted RBP24.14■■□□□ 1.45
PCDHA13-203ENST00000617769 FOXD4L3Q6VB84 417 aaPredicted RBP24.14■■□□□ 1.45
PCDHA13-203ENST00000617769 SCN11AQ9UI33 1791 aa24.14■■□□□ 1.45
PCDHA13-203ENST00000617769 LRSAM1Q6UWE0 723 aa24.13■■□□□ 1.45
PCDHA13-203ENST00000617769 JARID2Q92833 1246 aaPredicted RBP24.13■■□□□ 1.45
PCDHA13-203ENST00000617769 SGSM2O43147 1006 aa24.12■■□□□ 1.45
PCDHA13-203ENST00000617769 WDR17Q8IZU2 1322 aa24.12■■□□□ 1.45
PCDHA13-203ENST00000617769 MBD3O95983 291 aa24.12■■□□□ 1.45
PCDHA13-203ENST00000617769 IGKV5-2P06315 115 aa24.12■■□□□ 1.45
PCDHA13-203ENST00000617769 OS9Q13438 667 aaPredicted RBP24.12■■□□□ 1.45
PCDHA13-203ENST00000617769 DDX54Q8TDD1 881 aaKnown RBP24.12■■□□□ 1.45
PCDHA13-203ENST00000617769 C5P01031 1676 aa24.11■■□□□ 1.45
PCDHA13-203ENST00000617769 RAD50Q92878 1312 aa24.11■■□□□ 1.45
PCDHA13-203ENST00000617769 ALDH1L1O75891 902 aa24.11■■□□□ 1.45
PCDHA13-203ENST00000617769 DDX58O95786 925 aaKnown RBP24.11■■□□□ 1.45
PCDHA13-203ENST00000617769 SUCLG2Q96I99 432 aa24.11■■□□□ 1.45
PCDHA13-203ENST00000617769 EPB41L2O43491 1005 aaKnown RBP24.11■■□□□ 1.45
PCDHA13-203ENST00000617769 LINS1Q8NG48 757 aa24.11■■□□□ 1.45
PCDHA13-203ENST00000617769 SNRPA1P09661 255 aaKnown RBP24.1■■□□□ 1.45
PCDHA13-203ENST00000617769 LARP1Q6PKG0 1096 aaKnown RBP24.1■■□□□ 1.45
PCDHA13-203ENST00000617769 KAZALD1Q96I82 304 aa24.1■■□□□ 1.45
PCDHA13-203ENST00000617769 GRM8O00222 908 aa24.1■■□□□ 1.45
PCDHA13-203ENST00000617769 CNTROBQ8N137 903 aa24.1■■□□□ 1.45
PCDHA13-203ENST00000617769 ZCRB1Q8TBF4 217 aaKnown RBP24.1■■□□□ 1.45
PCDHA13-203ENST00000617769 PDLIM2Q96JY6 352 aa24.09■■□□□ 1.45
PCDHA13-203ENST00000617769 MYD88Q99836 296 aa24.09■■□□□ 1.45
PCDHA13-203ENST00000617769 GDPD2Q9HCC8 539 aa24.09■■□□□ 1.45
PCDHA13-203ENST00000617769 CWC27Q6UX04 472 aaKnown RBP24.09■■□□□ 1.45
PCDHA13-203ENST00000617769 FMNL2Q96PY5 1086 aa24.09■■□□□ 1.45
PCDHA13-203ENST00000617769 LSG1Q9H089 658 aaKnown RBP24.09■■□□□ 1.45
PCDHA13-203ENST00000617769 BICC1Q9H694 974 aaKnown RBP24.09■■□□□ 1.45
PCDHA13-203ENST00000617769 SNX14Q9Y5W7 946 aa24.09■■□□□ 1.45
PCDHA13-203ENST00000617769 MSNP26038 577 aaKnown RBP24.08■■□□□ 1.45
PCDHA13-203ENST00000617769 RASEFQ8IZ41 740 aa24.08■■□□□ 1.44
PCDHA13-203ENST00000617769 EVA1CP58658 441 aa24.07■■□□□ 1.44
PCDHA13-203ENST00000617769 LARP6Q9BRS8 491 aaKnown RBP24.06■■□□□ 1.44
PCDHA13-203ENST00000617769 LRP10Q7Z4F1 713 aa24.06■■□□□ 1.44
PCDHA13-203ENST00000617769 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.06■■□□□ 1.44
PCDHA13-203ENST00000617769 COL5A2P05997 1499 aaPredicted RBP24.06■■□□□ 1.44
PCDHA13-203ENST00000617769 HSP90AB4PQ58FF6 505 aa24.05■■□□□ 1.44
PCDHA13-203ENST00000617769 RNF214Q8ND24 703 aa24.05■■□□□ 1.44
PCDHA13-203ENST00000617769 KLHDC4Q8TBB5 520 aa24.05■■□□□ 1.44
PCDHA13-203ENST00000617769 WDR33Q9C0J8 1336 aaKnown RBP24.05■■□□□ 1.44
PCDHA13-203ENST00000617769 GADD45BO75293 160 aaPredicted RBP24.05■■□□□ 1.44
PCDHA13-203ENST00000617769 ANKRD13DQ6ZTN6 518 aa24.05■■□□□ 1.44
PCDHA13-203ENST00000617769 NEURL1BA8MQ27 555 aa24.04■■□□□ 1.44
PCDHA13-203ENST00000617769 MTX1Q13505 466 aa24.04■■□□□ 1.44
PCDHA13-203ENST00000617769 KIAA1211Q6ZU35 1233 aa24.04■■□□□ 1.44
PCDHA13-203ENST00000617769 TTC14Q96N46 770 aa24.04■■□□□ 1.44
PCDHA13-203ENST00000617769 ATP5J2-PTCD1G3V325 749 aa24.04■■□□□ 1.44
PCDHA13-203ENST00000617769 PTCD1O75127 700 aaKnown RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 246.8 ms