RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 CARMIL3Q8ND23 1372 aa18.21■□□□□ 0.51
SCAMP4-212ENST00000590266 FAM177BA6PVY3 158 aa18.21■□□□□ 0.51
SCAMP4-212ENST00000590266 TGFB2P61812 414 aa18.21■□□□□ 0.51
SCAMP4-212ENST00000590266 AIMP1Q12904 312 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-212ENST00000590266 HLFQ16534 295 aa18.21■□□□□ 0.51
SCAMP4-212ENST00000590266 SCN7AQ01118 1682 aa18.21■□□□□ 0.51
SCAMP4-212ENST00000590266 UTRNP46939 3433 aa18.2■□□□□ 0.5
SCAMP4-212ENST00000590266 CHRNA5P30532 468 aa18.2■□□□□ 0.5
SCAMP4-212ENST00000590266 PDIA6Q15084 440 aa18.2■□□□□ 0.5
SCAMP4-212ENST00000590266 CHPF2Q9P2E5 772 aa18.2■□□□□ 0.5
SCAMP4-212ENST00000590266 NIP7Q9Y221 180 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCAMP4-212ENST00000590266 CLEC4GQ6UXB4 293 aa18.19■□□□□ 0.5
SCAMP4-212ENST00000590266 CNBD1Q8NA66 436 aa18.19■□□□□ 0.5
SCAMP4-212ENST00000590266 BCS1LQ9Y276 419 aa18.19■□□□□ 0.5
SCAMP4-212ENST00000590266 MAP3K15Q6ZN16 1313 aa18.19■□□□□ 0.5
SCAMP4-212ENST00000590266 HOXB7P09629 217 aa18.18■□□□□ 0.5
SCAMP4-212ENST00000590266 NBPF5PQ86XG9 351 aaPredicted RBP18.18■□□□□ 0.5
SCAMP4-212ENST00000590266 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
SCAMP4-212ENST00000590266 XAGE3Q8WTP9 111 aa18.18■□□□□ 0.5
SCAMP4-212ENST00000590266 GPTP24298 496 aa18.17■□□□□ 0.5
SCAMP4-212ENST00000590266 PRR5LQ6MZQ0 368 aa18.17■□□□□ 0.5
SCAMP4-212ENST00000590266 COPS6Q7L5N1 327 aa18.17■□□□□ 0.5
SCAMP4-212ENST00000590266 DDX21Q9NR30 783 aaKnown RBP eCLIP18.17■□□□□ 0.5
SCAMP4-212ENST00000590266 ERVV-1B6SEH8 477 aa18.16■□□□□ 0.5
SCAMP4-212ENST00000590266 CCER2I3L3R5 266 aa18.16■□□□□ 0.5
SCAMP4-212ENST00000590266 ST5P78524 1137 aa18.16■□□□□ 0.5
SCAMP4-212ENST00000590266 GTF2E1P29083 439 aaPredicted RBP18.15■□□□□ 0.5
SCAMP4-212ENST00000590266 LRP10Q7Z4F1 713 aa18.15■□□□□ 0.5
SCAMP4-212ENST00000590266 C2CD5Q86YS7 1000 aa18.15■□□□□ 0.5
SCAMP4-212ENST00000590266 TSPYL6Q8N831 410 aa18.15■□□□□ 0.5
SCAMP4-212ENST00000590266 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
SCAMP4-212ENST00000590266 IL16Q14005 1332 aa18.15■□□□□ 0.5
SCAMP4-212ENST00000590266 KCNA3P22001 575 aa18.14■□□□□ 0.49
SCAMP4-212ENST00000590266 NCBP3Q53F19 620 aaKnown RBP18.14■□□□□ 0.49
SCAMP4-212ENST00000590266 WDR63Q8IWG1 891 aa18.14■□□□□ 0.49
SCAMP4-212ENST00000590266 MIER1Q8N108 512 aa18.14■□□□□ 0.49
SCAMP4-212ENST00000590266 PIM2Q9P1W9 311 aa18.14■□□□□ 0.49
SCAMP4-212ENST00000590266 BCORQ6W2J9 1755 aa18.14■□□□□ 0.49
SCAMP4-212ENST00000590266 H0YIN7 160 aa18.13■□□□□ 0.49
SCAMP4-212ENST00000590266 TCERG1O14776 1098 aaKnown RBP18.13■□□□□ 0.49
SCAMP4-212ENST00000590266 GIGYF2Q6Y7W6 1299 aaKnown RBP18.13■□□□□ 0.49
SCAMP4-212ENST00000590266 FANCIQ9NVI1 1328 aa18.13■□□□□ 0.49
SCAMP4-212ENST00000590266 RGL2O15211 777 aa18.12■□□□□ 0.49
SCAMP4-212ENST00000590266 PDE6BP35913 854 aa18.12■□□□□ 0.49
SCAMP4-212ENST00000590266 DALRD3Q5D0E6 543 aaKnown RBP18.12■□□□□ 0.49
SCAMP4-212ENST00000590266 TPTE2Q6XPS3 522 aa18.12■□□□□ 0.49
SCAMP4-212ENST00000590266 ZNF428Q96B54 188 aa18.12■□□□□ 0.49
SCAMP4-212ENST00000590266 BRIP1Q9BX63 1249 aa18.12■□□□□ 0.49
SCAMP4-212ENST00000590266 HYPKQ9NX55 129 aa18.12■□□□□ 0.49
SCAMP4-212ENST00000590266 CHD4Q14839 1912 aa18.11■□□□□ 0.49
SCAMP4-212ENST00000590266 C1QTNF8P60827 252 aa18.11■□□□□ 0.49
SCAMP4-212ENST00000590266 TWISTNBQ3B726 338 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-212ENST00000590266 CCDC30Q5VVM6 783 aa18.11■□□□□ 0.49
SCAMP4-212ENST00000590266 NUTM1Q86Y26 1132 aa18.11■□□□□ 0.49
SCAMP4-212ENST00000590266 ZNF622Q969S3 477 aaKnown RBP eCLIP18.11■□□□□ 0.49
SCAMP4-212ENST00000590266 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-212ENST00000590266 UBN2Q6ZU65 1347 aa18.11■□□□□ 0.49
SCAMP4-212ENST00000590266 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-212ENST00000590266 N4BP2Q86UW6 1770 aaPredicted RBP18.1■□□□□ 0.49
SCAMP4-212ENST00000590266 ATP10DQ9P241 1426 aa18.1■□□□□ 0.49
SCAMP4-212ENST00000590266 PHAXQ9H814 394 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-212ENST00000590266 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
SCAMP4-212ENST00000590266 SUSD4Q5VX71 490 aa18.09■□□□□ 0.49
SCAMP4-212ENST00000590266 ARHGAP27Q6ZUM4 889 aa18.09■□□□□ 0.49
SCAMP4-212ENST00000590266 NYXQ9GZU5 481 aa18.09■□□□□ 0.49
SCAMP4-212ENST00000590266 MYH16Q9H6N6 1097 aa18.09■□□□□ 0.49
SCAMP4-212ENST00000590266 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-212ENST00000590266 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
SCAMP4-212ENST00000590266 KIAA1551Q9HCM1 1747 aa18.09■□□□□ 0.49
SCAMP4-212ENST00000590266 NRXN2Q9P2S2 1712 aa18.09■□□□□ 0.49
SCAMP4-212ENST00000590266 EXOSC9Q06265 439 aaKnown RBP18.08■□□□□ 0.48
SCAMP4-212ENST00000590266 ERFEQ4G0M1 354 aa18.08■□□□□ 0.48
SCAMP4-212ENST00000590266 ANKRD13DQ6ZTN6 518 aa18.08■□□□□ 0.48
SCAMP4-212ENST00000590266 ZNF34Q8IZ26 560 aa18.08■□□□□ 0.48
SCAMP4-212ENST00000590266 STK31Q9BXU1 1019 aa18.08■□□□□ 0.48
SCAMP4-212ENST00000590266 GPBP1L1Q9HC44 474 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-212ENST00000590266 HSP90AB3PQ58FF7 597 aa18.07■□□□□ 0.48
SCAMP4-212ENST00000590266 PPP1R42Q7Z4L9 355 aa18.07■□□□□ 0.48
SCAMP4-212ENST00000590266 RIC3Q7Z5B4 369 aa18.07■□□□□ 0.48
SCAMP4-212ENST00000590266 TTLL6Q8N841 843 aa18.07■□□□□ 0.48
SCAMP4-212ENST00000590266 PLBD2Q8NHP8 589 aa18.07■□□□□ 0.48
SCAMP4-212ENST00000590266 ZNF526Q8TF50 670 aaPredicted RBP18.07■□□□□ 0.48
SCAMP4-212ENST00000590266 CHMP4AQ9BY43 222 aa18.07■□□□□ 0.48
SCAMP4-212ENST00000590266 AFDNP55196 1824 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-212ENST00000590266 PARP10Q53GL7 1025 aa18.06■□□□□ 0.48
SCAMP4-212ENST00000590266 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
SCAMP4-212ENST00000590266 ATP5J2-PTCD1G3V325 749 aa18.05■□□□□ 0.48
SCAMP4-212ENST00000590266 NTSR2O95665 410 aa18.05■□□□□ 0.48
SCAMP4-212ENST00000590266 TCIRG1Q13488 830 aa18.05■□□□□ 0.48
SCAMP4-212ENST00000590266 UTP14AQ9BVJ6 771 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-212ENST00000590266 PDZRN3Q9UPQ7 1066 aa18.05■□□□□ 0.48
SCAMP4-212ENST00000590266 NLRP10Q86W26 655 aa18.04■□□□□ 0.48
SCAMP4-212ENST00000590266 ZNF521Q96K83 1311 aa18.03■□□□□ 0.48
SCAMP4-212ENST00000590266 DDX58O95786 925 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-212ENST00000590266 SLC4A2P04920 1241 aa18.03■□□□□ 0.48
SCAMP4-212ENST00000590266 SRGNP10124 158 aa18.03■□□□□ 0.48
SCAMP4-212ENST00000590266 MASTLQ96GX5 879 aa18.03■□□□□ 0.48
SCAMP4-212ENST00000590266 TRMT112Q9UI30 125 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-212ENST00000590266 NPR1P16066 1061 aa18.02■□□□□ 0.48
SCAMP4-212ENST00000590266 STYK1Q6J9G0 422 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms