RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 PRAMEF22A3QJZ6 481 aa19.35■□□□□ 0.69
SNX29-203ENST00000564111 ARHGAP27Q6ZUM4 889 aa19.35■□□□□ 0.69
SNX29-203ENST00000564111 TTLL6Q8N841 843 aa19.35■□□□□ 0.69
SNX29-203ENST00000564111 NYXQ9GZU5 481 aa19.35■□□□□ 0.69
SNX29-203ENST00000564111 ZC3H4Q9UPT8 1303 aaKnown RBP19.35■□□□□ 0.69
SNX29-203ENST00000564111 ANKRD36CQ5JPF3 1778 aa19.35■□□□□ 0.69
SNX29-203ENST00000564111 PRR5LQ6MZQ0 368 aa19.35■□□□□ 0.69
SNX29-203ENST00000564111 RIC1Q4ADV7 1423 aa19.34■□□□□ 0.69
SNX29-203ENST00000564111 MAP3K15Q6ZN16 1313 aa19.34■□□□□ 0.69
SNX29-203ENST00000564111 ANP32CO43423 234 aa19.34■□□□□ 0.69
SNX29-203ENST00000564111 NBPF5PQ86XG9 351 aaPredicted RBP19.34■□□□□ 0.69
SNX29-203ENST00000564111 CHL1O00533 1208 aa19.33■□□□□ 0.69
SNX29-203ENST00000564111 CHRNA5P30532 468 aa19.33■□□□□ 0.69
SNX29-203ENST00000564111 SOGA3Q5TF21 947 aa19.33■□□□□ 0.69
SNX29-203ENST00000564111 STYK1Q6J9G0 422 aa19.33■□□□□ 0.69
SNX29-203ENST00000564111 TPTE2Q6XPS3 522 aa19.33■□□□□ 0.69
SNX29-203ENST00000564111 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
SNX29-203ENST00000564111 CNKSR1Q969H4 720 aa19.32■□□□□ 0.68
SNX29-203ENST00000564111 TRIM35Q9UPQ4 493 aa19.32■□□□□ 0.68
SNX29-203ENST00000564111 NIP7Q9Y221 180 aaKnown RBP eCLIP19.32■□□□□ 0.68
SNX29-203ENST00000564111 SBF1O95248 1867 aa19.32■□□□□ 0.68
SNX29-203ENST00000564111 GPBP1L1Q9HC44 474 aaPredicted RBP19.31■□□□□ 0.68
SNX29-203ENST00000564111 RRP7AQ9Y3A4 280 aaKnown RBP19.31■□□□□ 0.68
SNX29-203ENST00000564111 NEUROD2Q15784 382 aa19.31■□□□□ 0.68
SNX29-203ENST00000564111 CFAP44Q96MT7 982 aa19.31■□□□□ 0.68
SNX29-203ENST00000564111 RNF123Q5XPI4 1314 aa19.3■□□□□ 0.68
SNX29-203ENST00000564111 IFT57Q9NWB7 429 aa19.3■□□□□ 0.68
SNX29-203ENST00000564111 WWC3Q9ULE0 1092 aa19.3■□□□□ 0.68
SNX29-203ENST00000564111 TNRC6CQ9HCJ0 1690 aaKnown RBP19.3■□□□□ 0.68
SNX29-203ENST00000564111 GNAI1P63096 354 aa19.29■□□□□ 0.68
SNX29-203ENST00000564111 HSP90AB3PQ58FF7 597 aa19.29■□□□□ 0.68
SNX29-203ENST00000564111 MASTLQ96GX5 879 aa19.29■□□□□ 0.68
SNX29-203ENST00000564111 PIP4K2AP48426 406 aaPredicted RBP19.29■□□□□ 0.68
SNX29-203ENST00000564111 PARP10Q53GL7 1025 aa19.29■□□□□ 0.68
SNX29-203ENST00000564111 CACNA1SQ13698 1873 aa19.28■□□□□ 0.68
SNX29-203ENST00000564111 TIAM2Q8IVF5 1701 aa19.28■□□□□ 0.68
SNX29-203ENST00000564111 FER1L6Q2WGJ9 1857 aa19.28■□□□□ 0.68
SNX29-203ENST00000564111 DICER1Q9UPY3 1922 aaKnown RBP19.27■□□□□ 0.68
SNX29-203ENST00000564111 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
SNX29-203ENST00000564111 ZNF622Q969S3 477 aaKnown RBP eCLIP19.27■□□□□ 0.681e-6■■□□□ 12.5
SNX29-203ENST00000564111 MYL6BP14649 208 aa19.27■□□□□ 0.67
SNX29-203ENST00000564111 NPR1P16066 1061 aa19.27■□□□□ 0.67
SNX29-203ENST00000564111 GTF2E1P29083 439 aaPredicted RBP19.27■□□□□ 0.67
SNX29-203ENST00000564111 DDX21Q9NR30 783 aaKnown RBP eCLIP19.27■□□□□ 0.67
SNX29-203ENST00000564111 CCDC27Q2M243 656 aa19.26■□□□□ 0.67
SNX29-203ENST00000564111 GIGYF2Q6Y7W6 1299 aaKnown RBP19.26■□□□□ 0.67
SNX29-203ENST00000564111 PPP1R42Q7Z4L9 355 aa19.26■□□□□ 0.67
SNX29-203ENST00000564111 LAS1LQ9Y4W2 734 aaKnown RBP19.26■□□□□ 0.67
SNX29-203ENST00000564111 LTBP3Q9NS15 1303 aa19.26■□□□□ 0.67
SNX29-203ENST00000564111 KLRG2A4D1S0 409 aaPredicted RBP19.25■□□□□ 0.67
SNX29-203ENST00000564111 APAF1O14727 1248 aa19.25■□□□□ 0.67
SNX29-203ENST00000564111 C9orf131Q5VYM1 1079 aa19.25■□□□□ 0.67
SNX29-203ENST00000564111 KDM2BQ8NHM5 1336 aa19.25■□□□□ 0.67
SNX29-203ENST00000564111 SRGNP10124 158 aa19.25■□□□□ 0.67
SNX29-203ENST00000564111 EIF2S2P20042 333 aaKnown RBP19.25■□□□□ 0.67
SNX29-203ENST00000564111 LMNB1P20700 586 aa19.25■□□□□ 0.67
SNX29-203ENST00000564111 ZNF853P0CG23 659 aa19.24■□□□□ 0.67
SNX29-203ENST00000564111 RNF181Q9P0P0 153 aa19.24■□□□□ 0.67
SNX29-203ENST00000564111 HLFQ16534 295 aa19.23■□□□□ 0.67
SNX29-203ENST00000564111 GRIPAP1Q4V328 841 aa19.23■□□□□ 0.67
SNX29-203ENST00000564111 HDGFL1Q5TGJ6 251 aa19.23■□□□□ 0.67
SNX29-203ENST00000564111 TTLL7Q6ZT98 887 aa19.23■□□□□ 0.67
SNX29-203ENST00000564111 NGEFQ8N5V2 710 aa19.23■□□□□ 0.67
SNX29-203ENST00000564111 DBF4Q9UBU7 674 aaPredicted RBP19.23■□□□□ 0.67
SNX29-203ENST00000564111 CCDC88AQ3V6T2 1871 aa19.23■□□□□ 0.67
SNX29-203ENST00000564111 ALDH1B1P30837 517 aa19.23■□□□□ 0.67
SNX29-203ENST00000564111 ZNF34Q8IZ26 560 aa19.23■□□□□ 0.67
SNX29-203ENST00000564111 MRS2Q9HD23 443 aa19.23■□□□□ 0.67
SNX29-203ENST00000564111 SLX4Q8IY92 1834 aa19.22■□□□□ 0.67
SNX29-203ENST00000564111 PDIA6Q15084 440 aa19.22■□□□□ 0.67
SNX29-203ENST00000564111 ZBTB3Q9H5J0 574 aa19.22■□□□□ 0.67
SNX29-203ENST00000564111 HYPKQ9NX55 129 aa19.22■□□□□ 0.67
SNX29-203ENST00000564111 IL16Q14005 1332 aa19.22■□□□□ 0.67
SNX29-203ENST00000564111 LRP10Q7Z4F1 713 aa19.21■□□□□ 0.67
SNX29-203ENST00000564111 MBIPQ9NS73 344 aa19.21■□□□□ 0.67
SNX29-203ENST00000564111 CC2D2BQ6DHV5 1058 aa19.2■□□□□ 0.66
SNX29-203ENST00000564111 PRPF40BQ6NWY9 871 aaKnown RBP19.2■□□□□ 0.66
SNX29-203ENST00000564111 CCDC93Q567U6 631 aa19.2■□□□□ 0.66
SNX29-203ENST00000564111 DUSP27Q5VZP5 1158 aa19.2■□□□□ 0.66
SNX29-203ENST00000564111 LAMB2P55268 1798 aa19.19■□□□□ 0.66
SNX29-203ENST00000564111 CRY2Q49AN0 593 aa19.19■□□□□ 0.66
SNX29-203ENST00000564111 UTP14AQ9BVJ6 771 aaKnown RBP19.19■□□□□ 0.66
SNX29-203ENST00000564111 TAOK3Q9H2K8 898 aa19.19■□□□□ 0.66
SNX29-203ENST00000564111 RTKN2Q8IZC4 609 aa19.18■□□□□ 0.66
SNX29-203ENST00000564111 PLBD2Q8NHP8 589 aa19.18■□□□□ 0.66
SNX29-203ENST00000564111 XAGE3Q8WTP9 111 aa19.18■□□□□ 0.66
SNX29-203ENST00000564111 RPGRQ92834 1020 aaKnown RBP19.18■□□□□ 0.66
SNX29-203ENST00000564111 NTSR2O95665 410 aa19.17■□□□□ 0.66
SNX29-203ENST00000564111 COPS6Q7L5N1 327 aa19.17■□□□□ 0.66
SNX29-203ENST00000564111 CACNA1FO60840 1977 aa19.17■□□□□ 0.66
SNX29-203ENST00000564111 C21orf2O43822 256 aa19.17■□□□□ 0.66
SNX29-203ENST00000564111 RASSF7Q02833 373 aa19.17■□□□□ 0.66
SNX29-203ENST00000564111 CHPF2Q9P2E5 772 aa19.17■□□□□ 0.66
SNX29-203ENST00000564111 UBN2Q6ZU65 1347 aa19.17■□□□□ 0.66
SNX29-203ENST00000564111 ABCC12Q96J65 1359 aa19.17■□□□□ 0.66
SNX29-203ENST00000564111 CCDC24Q8N4L8 307 aa19.16■□□□□ 0.66
SNX29-203ENST00000564111 ZNF526Q8TF50 670 aaPredicted RBP19.16■□□□□ 0.66
SNX29-203ENST00000564111 RBM17Q96I25 401 aaKnown RBP19.16■□□□□ 0.66
SNX29-203ENST00000564111 FAM177BA6PVY3 158 aa19.16■□□□□ 0.66
SNX29-203ENST00000564111 NFKBIEO00221 500 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms