RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 SLC39A6Q13433 755 aa9.99□□□□□ -0.81
ZEB1-223ENST00000561304 SPNS2Q8IVW8 549 aa9.99□□□□□ -0.81
ZEB1-223ENST00000561304 BCORQ6W2J9 1755 aa9.98□□□□□ -0.81
ZEB1-223ENST00000561304 ARFGEF1Q9Y6D6 1849 aa9.98□□□□□ -0.81
ZEB1-223ENST00000561304 NRXN2Q9P2S2 1712 aa9.98□□□□□ -0.81
ZEB1-223ENST00000561304 RSPH6AQ9H0K4 717 aa9.98□□□□□ -0.81
ZEB1-223ENST00000561304 LAMB4A4D0S4 1761 aa9.97□□□□□ -0.81
ZEB1-223ENST00000561304 KDM3BQ7LBC6 1761 aa9.97□□□□□ -0.81
ZEB1-223ENST00000561304 DLEC1Q9Y238 1755 aa9.97□□□□□ -0.81
ZEB1-223ENST00000561304 CRKLP46109 303 aaKnown RBP9.97□□□□□ -0.81
ZEB1-223ENST00000561304 GPR162Q16538 588 aa9.97□□□□□ -0.81
ZEB1-223ENST00000561304 RC3H1Q5TC82 1133 aaKnown RBP9.97□□□□□ -0.81
ZEB1-223ENST00000561304 DNAJC10Q8IXB1 793 aa9.97□□□□□ -0.81
ZEB1-223ENST00000561304 ARHGEF1Q92888 912 aaKnown RBP9.97□□□□□ -0.81
ZEB1-223ENST00000561304 PHACTR3Q96KR7 559 aa9.97□□□□□ -0.81
ZEB1-223ENST00000561304 RTCBQ9Y3I0 505 aaKnown RBP9.97□□□□□ -0.81
ZEB1-223ENST00000561304 C10orf71Q711Q0 1435 aa9.96□□□□□ -0.81
ZEB1-223ENST00000561304 PXDNLA1KZ92 1463 aa9.96□□□□□ -0.81
ZEB1-223ENST00000561304 RPS6KA4O75676 772 aa9.96□□□□□ -0.82
ZEB1-223ENST00000561304 HMGB2P26583 209 aaKnown RBP9.96□□□□□ -0.82
ZEB1-223ENST00000561304 WWC3Q9ULE0 1092 aa9.96□□□□□ -0.82
ZEB1-223ENST00000561304 CACNA1SQ13698 1873 aa9.96□□□□□ -0.82
ZEB1-223ENST00000561304 ANKRD31Q8N7Z5 1873 aa9.96□□□□□ -0.82
ZEB1-223ENST00000561304 MMP10P09238 476 aa9.95□□□□□ -0.82
ZEB1-223ENST00000561304 GYS1P13807 737 aa9.95□□□□□ -0.82
ZEB1-223ENST00000561304 PRKAR2BP31323 418 aa9.95□□□□□ -0.82
ZEB1-223ENST00000561304 TRAPPC3LQ5T215 181 aa9.95□□□□□ -0.82
ZEB1-223ENST00000561304 INTS5Q6P9B9 1019 aaKnown RBP9.95□□□□□ -0.82
ZEB1-223ENST00000561304 IL17REQ8NFR9 667 aa9.95□□□□□ -0.82
ZEB1-223ENST00000561304 SRP68Q9UHB9 627 aaKnown RBP9.95□□□□□ -0.82
ZEB1-223ENST00000561304 CD2APQ9Y5K6 639 aa9.95□□□□□ -0.82
ZEB1-223ENST00000561304 CEMIPQ8WUJ3 1361 aa9.95□□□□□ -0.82
ZEB1-223ENST00000561304 ZNF784Q8NCA9 323 aaPredicted RBP9.94□□□□□ -0.82
ZEB1-223ENST00000561304 USP42Q9H9J4 1324 aaKnown RBP9.94□□□□□ -0.82
ZEB1-223ENST00000561304 COL11A2P13942 1736 aaPredicted RBP9.94□□□□□ -0.82
ZEB1-223ENST00000561304 GNAT3A8MTJ3 354 aa9.93□□□□□ -0.82
ZEB1-223ENST00000561304 SBF1O95248 1867 aa9.93□□□□□ -0.82
ZEB1-223ENST00000561304 CYP19A1P11511 503 aaPredicted RBP9.93□□□□□ -0.82
ZEB1-223ENST00000561304 SOS1Q07889 1333 aaPredicted RBP9.93□□□□□ -0.82
ZEB1-223ENST00000561304 GAS2L2Q8NHY3 880 aa9.93□□□□□ -0.82
ZEB1-223ENST00000561304 BBXQ8WY36 941 aaPredicted RBP9.93□□□□□ -0.82
ZEB1-223ENST00000561304 CFAP53Q96M91 514 aa9.93□□□□□ -0.82
ZEB1-223ENST00000561304 ZBTB1Q9Y2K1 713 aa9.93□□□□□ -0.82
ZEB1-223ENST00000561304 CCDC88AQ3V6T2 1871 aa9.92□□□□□ -0.82
ZEB1-223ENST00000561304 COL15A1P39059 1388 aa9.92□□□□□ -0.82
ZEB1-223ENST00000561304 RFC4P35249 363 aa9.92□□□□□ -0.82
ZEB1-223ENST00000561304 DDR1Q08345 913 aa9.92□□□□□ -0.82
ZEB1-223ENST00000561304 CCDC87Q9NVE4 849 aa9.92□□□□□ -0.82
ZEB1-223ENST00000561304 HEG1Q9ULI3 1381 aa9.91□□□□□ -0.82
ZEB1-223ENST00000561304 KCNQ3O43525 872 aa9.91□□□□□ -0.82
ZEB1-223ENST00000561304 ST18O60284 1047 aa9.91□□□□□ -0.82
ZEB1-223ENST00000561304 U2AF1L5P0DN76 240 aaPredicted RBP9.91□□□□□ -0.82
ZEB1-223ENST00000561304 U2AF1Q01081 240 aaKnown RBP eCLIP9.91□□□□□ -0.82
ZEB1-223ENST00000561304 ZNF496Q96IT1 587 aaPredicted RBP9.91□□□□□ -0.82
ZEB1-223ENST00000561304 SNPHO15079 494 aa9.9□□□□□ -0.82
ZEB1-223ENST00000561304 PPP1R37O75864 691 aa9.9□□□□□ -0.82
ZEB1-223ENST00000561304 NLGN1Q8N2Q7 840 aa9.9□□□□□ -0.82
ZEB1-223ENST00000561304 ADCY9O60503 1353 aa9.9□□□□□ -0.83
ZEB1-223ENST00000561304 GTPBP6O43824 516 aaPredicted RBP9.89□□□□□ -0.83
ZEB1-223ENST00000561304 TEFQ10587 303 aa9.89□□□□□ -0.83
ZEB1-223ENST00000561304 DCTN1Q14203 1278 aa9.89□□□□□ -0.83
ZEB1-223ENST00000561304 USPL1Q5W0Q7 1092 aa9.89□□□□□ -0.83
ZEB1-223ENST00000561304 ZNF790Q6PG37 636 aa9.89□□□□□ -0.83
ZEB1-223ENST00000561304 MCM10Q7L590 875 aa9.89□□□□□ -0.83
ZEB1-223ENST00000561304 VSIG10Q8N0Z9 540 aa9.89□□□□□ -0.83
ZEB1-223ENST00000561304 BCL2L12Q9HB09 334 aa9.89□□□□□ -0.83
ZEB1-223ENST00000561304 NUDCQ9Y266 331 aa9.89□□□□□ -0.83
ZEB1-223ENST00000561304 NUP98P52948 1817 aa9.89□□□□□ -0.83
ZEB1-223ENST00000561304 ARFGEF2Q9Y6D5 1785 aa9.89□□□□□ -0.83
ZEB1-223ENST00000561304 A0A0G2JLW4 131 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 PRAMEF22A3QJZ6 481 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 POLRMTO00411 1230 aaKnown RBP9.88□□□□□ -0.83
ZEB1-223ENST00000561304 FCHSD2O94868 740 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 TTC5Q8N0Z6 440 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 PARP3Q9Y6F1 533 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 CARMIL3Q8ND23 1372 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 TIAM2Q8IVF5 1701 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 BTBD11A6QL63 1104 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 GRIN3BO60391 1043 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 DPEP1P16444 411 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 CANXP27824 592 aaKnown RBP9.88□□□□□ -0.83
ZEB1-223ENST00000561304 TM4SF1P30408 202 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 PLEKHF1Q96S99 279 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 NARFQ9UHQ1 456 aa9.88□□□□□ -0.83
ZEB1-223ENST00000561304 ATP10DQ9P241 1426 aa9.87□□□□□ -0.83
ZEB1-223ENST00000561304 CEP350Q5VT06 3117 aa9.87□□□□□ -0.83
ZEB1-223ENST00000561304 KCNA3P22001 575 aa9.87□□□□□ -0.83
ZEB1-223ENST00000561304 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
ZEB1-223ENST00000561304 EIF5P55010 431 aaKnown RBP9.87□□□□□ -0.83
ZEB1-223ENST00000561304 DDX10Q13206 875 aaKnown RBP9.87□□□□□ -0.83
ZEB1-223ENST00000561304 NFIXQ14938 502 aa9.87□□□□□ -0.83
ZEB1-223ENST00000561304 ZPR1O75312 459 aa9.86□□□□□ -0.83
ZEB1-223ENST00000561304 A1BGP04217 495 aa9.86□□□□□ -0.83
ZEB1-223ENST00000561304 TGFB2P61812 414 aa9.86□□□□□ -0.83
ZEB1-223ENST00000561304 FMNL2Q96PY5 1086 aa9.86□□□□□ -0.83
ZEB1-223ENST00000561304 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.86□□□□□ -0.83
ZEB1-223ENST00000561304 FER1L6Q2WGJ9 1857 aa9.86□□□□□ -0.83
ZEB1-223ENST00000561304 TNRC6CQ9HCJ0 1690 aaKnown RBP9.85□□□□□ -0.83
ZEB1-223ENST00000561304 DICER1Q9UPY3 1922 aaKnown RBP9.85□□□□□ -0.83
ZEB1-223ENST00000561304 CHRNA5P30532 468 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms