RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 NUP62CLQ9H1M0 184 aa9.44□□□□□ -0.9
DDX47-212ENST00000545038 NAP1L2Q9ULW6 460 aaPredicted RBP9.44□□□□□ -0.9
DDX47-212ENST00000545038 MLH3Q9UHC1 1453 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 EPB41L2O43491 1005 aaKnown RBP9.43□□□□□ -0.9
DDX47-212ENST00000545038 CWC27Q6UX04 472 aaKnown RBP9.43□□□□□ -0.9
DDX47-212ENST00000545038 RBM43Q6ZSC3 357 aaKnown RBP9.43□□□□□ -0.9
DDX47-212ENST00000545038 NYAP1Q6ZVC0 841 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 ZNF592Q92610 1267 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 TRIM5Q9C035 493 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 TTC21AQ8NDW8 1320 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 FAM208AQ9UK61 1670 aaKnown RBP9.43□□□□□ -0.9
DDX47-212ENST00000545038 ELF2Q15723 593 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 KRT222Q8N1A0 295 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 KLHL34Q8N239 644 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 LRRN4CLQ8ND94 238 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 TDRD7Q8NHU6 1098 aaKnown RBP9.43□□□□□ -0.9
DDX47-212ENST00000545038 USP44Q9H0E7 712 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 DNAJC25Q9H1X3 360 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 PAXBP1Q9Y5B6 917 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 ATP6V1DQ9Y5K8 247 aa9.43□□□□□ -0.9
DDX47-212ENST00000545038 RGPD1P0DJD0 1748 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 MON2Q7Z3U7 1717 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 PEAK1Q9H792 1746 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 SOS1Q07889 1333 aaPredicted RBP9.42□□□□□ -0.9
DDX47-212ENST00000545038 ERICH4A6NGS2 130 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 NR1I2O75469 434 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 MAPK8IP2Q13387 824 aaPredicted RBP9.42□□□□□ -0.9
DDX47-212ENST00000545038 TPD52L1Q16890 204 aaPredicted RBP9.42□□□□□ -0.9
DDX47-212ENST00000545038 CEP135Q66GS9 1140 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 DRC7Q8IY82 874 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
DDX47-212ENST00000545038 TPCN1Q9ULQ1 816 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 C3P01024 1663 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 RIMBP3CA6NJZ7 1639 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 RIMBP3BA6NNM3 1639 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 RIMBP3Q9UFD9 1639 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 AOX1Q06278 1338 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 N4BP2Q86UW6 1770 aaPredicted RBP9.42□□□□□ -0.9
DDX47-212ENST00000545038 FLIIQ13045 1269 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 LRRC8AQ8IWT6 810 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 NECTIN2Q92692 538 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 PGBD1Q96JS3 809 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 CLIP2Q9UDT6 1046 aa9.42□□□□□ -0.9
DDX47-212ENST00000545038 A0A087WWV3 80 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 HSP90AB2PQ58FF8 381 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 ZNF397Q8NF99 534 aaPredicted RBP9.41□□□□□ -0.9
DDX47-212ENST00000545038 COG3Q96JB2 828 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 JAKMIP1Q96N16 626 aaKnown RBP9.41□□□□□ -0.9
DDX47-212ENST00000545038 TNMDQ9H2S6 317 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 DLC1Q96QB1 1528 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 ELP1O95163 1332 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 ZNF165P49910 485 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 HAP1P54257 671 aaPredicted RBP9.41□□□□□ -0.9
DDX47-212ENST00000545038 SSH3Q8TE77 659 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 ZSWIM6Q9HCJ5 1215 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 TSPYL4Q9UJ04 414 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 TAF6LQ9Y6J9 622 aa9.41□□□□□ -0.9
DDX47-212ENST00000545038 ADCY9O60503 1353 aa9.4□□□□□ -0.9
DDX47-212ENST00000545038 CHD2O14647 1828 aaKnown RBP9.4□□□□□ -0.9
DDX47-212ENST00000545038 TULP2O00295 520 aa9.4□□□□□ -0.9
DDX47-212ENST00000545038 CCZ1BP86790 482 aa9.4□□□□□ -0.9
DDX47-212ENST00000545038 CCZ1P86791 482 aaPredicted RBP9.4□□□□□ -0.9
DDX47-212ENST00000545038 VPS53Q5VIR6 699 aa9.4□□□□□ -0.9
DDX47-212ENST00000545038 PRPF40BQ6NWY9 871 aaKnown RBP9.4□□□□□ -0.9
DDX47-212ENST00000545038 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.4□□□□□ -0.9
DDX47-212ENST00000545038 KIF1BPQ96EK5 621 aa9.4□□□□□ -0.9
DDX47-212ENST00000545038 TCEANC2Q96MN5 208 aa9.4□□□□□ -0.9
DDX47-212ENST00000545038 PDRG1Q9NUG6 133 aa9.4□□□□□ -0.9
DDX47-212ENST00000545038 NPHP1O15259 732 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 GNAI3P08754 354 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 KRT85P78386 507 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 IQCB1Q15051 598 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 MTHFSDQ2M296 383 aaKnown RBP9.39□□□□□ -0.91
DDX47-212ENST00000545038 FBXO31Q5XUX0 539 aaPredicted RBP9.39□□□□□ -0.91
DDX47-212ENST00000545038 C11orf57Q6ZUT1 292 aaPredicted RBP9.39□□□□□ -0.91
DDX47-212ENST00000545038 RHPN1Q8TCX5 695 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 CLSTN2Q9H4D0 955 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 TRMT1Q9NXH9 659 aaKnown RBP9.39□□□□□ -0.91
DDX47-212ENST00000545038 USP16Q9Y5T5 823 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 AKAP12Q02952 1782 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 ARHGEF10O15013 1369 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
DDX47-212ENST00000545038 LARP1BQ659C4 914 aaKnown RBP9.39□□□□□ -0.91
DDX47-212ENST00000545038 PPP1R42Q7Z4L9 355 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 PLCD3Q8N3E9 789 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 LEO1Q8WVC0 666 aaPredicted RBP9.39□□□□□ -0.91
DDX47-212ENST00000545038 SYTL4Q96C24 671 aaPredicted RBP9.39□□□□□ -0.91
DDX47-212ENST00000545038 SLC52A1Q9NWF4 448 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 CACNA1FO60840 1977 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 MAP3K19Q56UN5 1328 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 TTC21BQ7Z4L5 1316 aa9.39□□□□□ -0.91
DDX47-212ENST00000545038 RAPGEF3O95398 923 aa9.38□□□□□ -0.91
DDX47-212ENST00000545038 POLA2Q14181 598 aa9.38□□□□□ -0.91
DDX47-212ENST00000545038 NECTIN1Q15223 517 aa9.38□□□□□ -0.91
DDX47-212ENST00000545038 LARP1Q6PKG0 1096 aaKnown RBP9.38□□□□□ -0.91
DDX47-212ENST00000545038 KCNB2Q92953 911 aa9.38□□□□□ -0.91
DDX47-212ENST00000545038 TIGD1Q96MW7 591 aa9.38□□□□□ -0.91
DDX47-212ENST00000545038 FHOD1Q9Y613 1164 aa9.38□□□□□ -0.91
DDX47-212ENST00000545038 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
DDX47-212ENST00000545038 SKILP12757 684 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms