RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 ATP5J2-PTCD1G3V325 749 aa16.82■□□□□ 0.28
LSM14A-203ENST00000544216 SGSM2O43147 1006 aa16.82■□□□□ 0.28
LSM14A-203ENST00000544216 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
LSM14A-203ENST00000544216 MCM2P49736 904 aa16.82■□□□□ 0.28
LSM14A-203ENST00000544216 CABP4P57796 275 aa16.82■□□□□ 0.28
LSM14A-203ENST00000544216 CPA1P15085 419 aa16.81■□□□□ 0.28
LSM14A-203ENST00000544216 ZDHHC9Q9Y397 364 aa16.81■□□□□ 0.28
LSM14A-203ENST00000544216 ANAPC15P60006 121 aa16.81■□□□□ 0.28
LSM14A-203ENST00000544216 PDIA6Q15084 440 aa16.81■□□□□ 0.28
LSM14A-203ENST00000544216 ERC1Q8IUD2 1116 aa16.8■□□□□ 0.28
LSM14A-203ENST00000544216 BOLA2Q9H3K6 86 aa16.8■□□□□ 0.28
LSM14A-203ENST00000544216 IGKV5-2P06315 115 aa16.8■□□□□ 0.28
LSM14A-203ENST00000544216 KLHL40Q2TBA0 621 aa16.8■□□□□ 0.28
LSM14A-203ENST00000544216 HSPA4P34932 840 aa16.79■□□□□ 0.28
LSM14A-203ENST00000544216 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
LSM14A-203ENST00000544216 RASEFQ8IZ41 740 aa16.79■□□□□ 0.28
LSM14A-203ENST00000544216 CHMP3Q9Y3E7 222 aa16.79■□□□□ 0.28
LSM14A-203ENST00000544216 CYP27B1O15528 508 aa16.79■□□□□ 0.28
LSM14A-203ENST00000544216 CADPS2Q86UW7 1296 aa16.79■□□□□ 0.28
LSM14A-203ENST00000544216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.79■□□□□ 0.28
LSM14A-203ENST00000544216 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
LSM14A-203ENST00000544216 KAZALD1Q96I82 304 aa16.79■□□□□ 0.28
LSM14A-203ENST00000544216 RBM27Q9P2N5 1060 aaKnown RBP16.79■□□□□ 0.28
LSM14A-203ENST00000544216 CYP2E1P05181 493 aaPredicted RBP16.78■□□□□ 0.28
LSM14A-203ENST00000544216 SNRPA1P09661 255 aaKnown RBP16.78■□□□□ 0.28
LSM14A-203ENST00000544216 RUFY2Q8WXA3 655 aa16.78■□□□□ 0.28
LSM14A-203ENST00000544216 EAF2Q96CJ1 260 aaPredicted RBP16.78■□□□□ 0.28
LSM14A-203ENST00000544216 LMBRD1Q9NUN5 540 aa16.78■□□□□ 0.28
LSM14A-203ENST00000544216 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
LSM14A-203ENST00000544216 PRPF40BQ6NWY9 871 aaKnown RBP16.78■□□□□ 0.28
LSM14A-203ENST00000544216 UBE3BQ7Z3V4 1068 aa16.78■□□□□ 0.28
LSM14A-203ENST00000544216 PRDM11Q9NQV5 511 aa16.78■□□□□ 0.28
LSM14A-203ENST00000544216 SNX14Q9Y5W7 946 aa16.78■□□□□ 0.28
LSM14A-203ENST00000544216 MTX1Q13505 466 aa16.78■□□□□ 0.28
LSM14A-203ENST00000544216 TOM1L2Q6ZVM7 507 aa16.78■□□□□ 0.28
LSM14A-203ENST00000544216 TLR7Q9NYK1 1049 aaKnown RBP16.78■□□□□ 0.28
LSM14A-203ENST00000544216 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
LSM14A-203ENST00000544216 TTC41PQ6P2S7 1318 aa16.77■□□□□ 0.28
LSM14A-203ENST00000544216 SASH1O94885 1247 aa16.77■□□□□ 0.28
LSM14A-203ENST00000544216 CASTP20810 708 aaKnown RBP16.77■□□□□ 0.28
LSM14A-203ENST00000544216 FAM43AQ8N2R8 423 aa16.77■□□□□ 0.28
LSM14A-203ENST00000544216 NEURL1BA8MQ27 555 aa16.77■□□□□ 0.28
LSM14A-203ENST00000544216 EPHA10Q5JZY3 1008 aa16.77■□□□□ 0.28
LSM14A-203ENST00000544216 LSG1Q9H089 658 aaKnown RBP16.77■□□□□ 0.28
LSM14A-203ENST00000544216 RAD50Q92878 1312 aa16.77■□□□□ 0.27
LSM14A-203ENST00000544216 PTH1RQ03431 593 aa16.77■□□□□ 0.27
LSM14A-203ENST00000544216 GCKRQ14397 625 aa16.77■□□□□ 0.27
LSM14A-203ENST00000544216 DCAF5Q96JK2 942 aa16.77■□□□□ 0.27
LSM14A-203ENST00000544216 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.27
LSM14A-203ENST00000544216 TRIM44Q96DX7 344 aaPredicted RBP16.76■□□□□ 0.27
LSM14A-203ENST00000544216 GDPD2Q9HCC8 539 aa16.76■□□□□ 0.27
LSM14A-203ENST00000544216 CLEC17AQ6ZS10 378 aa16.76■□□□□ 0.27
LSM14A-203ENST00000544216 FSD1Q9BTV5 496 aa16.76■□□□□ 0.27
LSM14A-203ENST00000544216 JAKMIP1Q96N16 626 aaKnown RBP16.76■□□□□ 0.27
LSM14A-203ENST00000544216 USP54Q70EL1 1684 aa16.75■□□□□ 0.27
LSM14A-203ENST00000544216 ANP32BQ92688 251 aaKnown RBP16.75■□□□□ 0.27
LSM14A-203ENST00000544216 FAM227BQ96M60 508 aa16.75■□□□□ 0.27
LSM14A-203ENST00000544216 METTL22Q9BUU2 404 aaPredicted RBP16.75■□□□□ 0.27
LSM14A-203ENST00000544216 RRAGDQ9NQL2 400 aaPredicted RBP16.75■□□□□ 0.27
LSM14A-203ENST00000544216 STRN4Q9NRL3 753 aa16.75■□□□□ 0.27
LSM14A-203ENST00000544216 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
LSM14A-203ENST00000544216 SLIT3O75094 1523 aa16.75■□□□□ 0.27
LSM14A-203ENST00000544216 MED1Q15648 1581 aaPredicted RBP16.75■□□□□ 0.27
LSM14A-203ENST00000544216 A0A087WZG4 1122 aa16.74■□□□□ 0.27
LSM14A-203ENST00000544216 AK2P54819 239 aa16.74■□□□□ 0.27
LSM14A-203ENST00000544216 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
LSM14A-203ENST00000544216 EDC3Q96F86 508 aaKnown RBP16.74■□□□□ 0.27
LSM14A-203ENST00000544216 KDM6AO15550 1401 aaPredicted RBP16.74■□□□□ 0.27
LSM14A-203ENST00000544216 NDUFB9Q9Y6M9 179 aa16.74■□□□□ 0.27
LSM14A-203ENST00000544216 ZNF142P52746 1687 aaPredicted RBP16.74■□□□□ 0.27
LSM14A-203ENST00000544216 ADAMTSL3P82987 1691 aa16.74■□□□□ 0.27
LSM14A-203ENST00000544216 MEGF6O75095 1541 aa16.73■□□□□ 0.27
LSM14A-203ENST00000544216 NASPP49321 788 aaPredicted RBP16.73■□□□□ 0.27
LSM14A-203ENST00000544216 CUL4AQ13619 759 aa16.73■□□□□ 0.27
LSM14A-203ENST00000544216 ZSCAN23Q3MJ62 389 aa16.73■□□□□ 0.27
LSM14A-203ENST00000544216 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
LSM14A-203ENST00000544216 NMIQ13287 307 aaPredicted RBP16.73■□□□□ 0.27
LSM14A-203ENST00000544216 GPT2Q8TD30 523 aa16.73■□□□□ 0.27
LSM14A-203ENST00000544216 MST1RQ04912 1400 aa16.72■□□□□ 0.27
LSM14A-203ENST00000544216 ADCK5Q3MIX3 580 aa16.72■□□□□ 0.27
LSM14A-203ENST00000544216 NSFL1CQ9UNZ2 370 aaKnown RBP16.72■□□□□ 0.27
LSM14A-203ENST00000544216 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
LSM14A-203ENST00000544216 BRD1O95696 1058 aa16.72■□□□□ 0.27
LSM14A-203ENST00000544216 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
LSM14A-203ENST00000544216 INTS4Q96HW7 963 aaKnown RBP16.72■□□□□ 0.27
LSM14A-203ENST00000544216 RGPD5Q99666 1765 aa16.71■□□□□ 0.27
LSM14A-203ENST00000544216 DNAJC2Q99543 621 aaKnown RBP16.71■□□□□ 0.27
LSM14A-203ENST00000544216 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.71■□□□□ 0.273e-7■■■■□ 25.6
LSM14A-203ENST00000544216 LMO7Q8WWI1 1683 aa16.71■□□□□ 0.27
LSM14A-203ENST00000544216 TCEANC2Q96MN5 208 aa16.71■□□□□ 0.27
LSM14A-203ENST00000544216 PDRG1Q9NUG6 133 aa16.71■□□□□ 0.27
LSM14A-203ENST00000544216 LIMCH1Q9UPQ0 1083 aa16.71■□□□□ 0.27
LSM14A-203ENST00000544216 CCDC83Q8IWF9 413 aa16.71■□□□□ 0.26
LSM14A-203ENST00000544216 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.26
LSM14A-203ENST00000544216 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
LSM14A-203ENST00000544216 TFCP2Q12800 502 aa16.7■□□□□ 0.26
LSM14A-203ENST00000544216 RUFY3Q7L099 469 aa16.7■□□□□ 0.26
LSM14A-203ENST00000544216 SYCE3A1L190 88 aa16.7■□□□□ 0.26
LSM14A-203ENST00000544216 EVA1CP58658 441 aa16.7■□□□□ 0.26
LSM14A-203ENST00000544216 ZCRB1Q8TBF4 217 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms