RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 SLC39A6Q13433 755 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 EVI5LQ96CN4 794 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 NCKAP5LQ9HCH0 1330 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 SSRP1Q08945 709 aaKnown RBP7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 SEPT7Q16181 437 aaKnown RBP7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 ZNF608Q9ULD9 1512 aaPredicted RBP7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 WDR97A6NE52 1622 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 HMGN5P82970 282 aaKnown RBP7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 GUCY1B3Q02153 619 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 AXDND1Q5T1B0 1012 aaPredicted RBP7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 NIP7Q9Y221 180 aaKnown RBP eCLIP7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 LMTK3Q96Q04 1460 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 UQCRFS1P1P0C7P4 283 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 KIF5BP33176 963 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 FAM177A1Q8N128 213 aaPredicted RBP7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 CCDC12Q8WUD4 166 aaPredicted RBP7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 TSG101Q99816 390 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 NKTRP30414 1462 aaKnown RBP7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 ANKRD36BQ8N2N9 1353 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 GOLGA6L10A6NI86 522 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 C19orf44Q9H6X5 657 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 IQSEC3Q9UPP2 1182 aaPredicted RBP7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 PARP3Q9Y6F1 533 aa7.43□□□□□ -1.22
UBQLN1-206ENST00000533705 KDM5BQ9UGL1 1544 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 BAG4O95429 457 aaKnown RBP7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 GSTO1P78417 241 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 ZRSR2Q15696 482 aaKnown RBP7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 MAP3K11Q16584 847 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 RBM26Q5T8P6 1007 aaKnown RBP7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 ZNF397Q8NF99 534 aaPredicted RBP7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 LRRC59Q96AG4 307 aaKnown RBP7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 KAT14Q9H8E8 782 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 MBIPQ9NS73 344 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 CETN2P41208 172 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 FILIP1Q7Z7B0 1213 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 TAF4BQ92750 862 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 VTI1AQ96AJ9 217 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 CCDC97Q96F63 343 aaPredicted RBP7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 SAMM50Q9Y512 469 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 EPB41L2O43491 1005 aaKnown RBP7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 KIF20AO95235 890 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 TRIM27P14373 513 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 CFAP100Q494V2 611 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 VSIG10Q8N0Z9 540 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 MPNDQ8N594 471 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 SCAND2PQ9GZW5 306 aaPredicted RBP7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 RTCBQ9Y3I0 505 aaKnown RBP7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 IL2RBP14784 551 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 JDP2Q8WYK2 163 aa7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 CRNKL1Q9BZJ0 848 aaKnown RBP7.42□□□□□ -1.22
UBQLN1-206ENST00000533705 FKBP15Q5T1M5 1219 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 KIAA1328Q86T90 577 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 NF2P35240 595 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 HAND2P61296 217 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 TMEM67Q5HYA8 995 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 KLHL10Q6JEL2 608 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 MFSD6Q6ZSS7 791 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 COPS6Q7L5N1 327 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 CCDC144CPQ8IYA2 1237 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 MPHOSPH6Q99547 160 aaKnown RBP7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 STX8Q9UNK0 236 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 C11orf95C9JLR9 678 aaPredicted RBP7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 CCT2P78371 535 aaKnown RBP7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 SIRT1Q96EB6 747 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 URB2Q14146 1524 aaKnown RBP7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 ECM2O94769 699 aaPredicted RBP7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 JAKMIP3Q5VZ66 844 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 IQCEQ6IPM2 695 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 ZC3H12CQ9C0D7 883 aaKnown RBP7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 VEZTQ9HBM0 779 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 TPTE2Q6XPS3 522 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 LIMCH1Q9UPQ0 1083 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 ASXL2Q76L83 1435 aa7.41□□□□□ -1.22
UBQLN1-206ENST00000533705 H0YHG0 523 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 FGFR1OPO95684 399 aaKnown RBP7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 IARSP41252 1262 aaKnown RBP7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 PICALMQ13492 652 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 ARHGAP29Q52LW3 1261 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 CCDC150Q8NCX0 1101 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 CAMK4Q16566 473 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 ZGPATQ8N5A5 531 aaKnown RBP7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 CCDC191Q8NCU4 936 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 CHPF2Q9P2E5 772 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 CA8P35219 290 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 CACNA2D4Q7Z3S7 1137 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 DZIP3Q86Y13 1208 aaKnown RBP7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 CCDC112Q8NEF3 446 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 DRC1Q96MC2 740 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 UTP14AQ9BVJ6 771 aaKnown RBP7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 USP16Q9Y5T5 823 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 IL16Q14005 1332 aa7.4□□□□□ -1.22
UBQLN1-206ENST00000533705 CYP7A1P22680 504 aa7.4□□□□□ -1.23
UBQLN1-206ENST00000533705 AKAP4Q5JQC9 854 aa7.4□□□□□ -1.23
UBQLN1-206ENST00000533705 VPS36Q86VN1 386 aa7.4□□□□□ -1.23
UBQLN1-206ENST00000533705 TCP11L1Q9NUJ3 509 aa7.4□□□□□ -1.23
UBQLN1-206ENST00000533705 NSFL1CQ9UNZ2 370 aaKnown RBP7.4□□□□□ -1.23
UBQLN1-206ENST00000533705 ERLIN1O75477 346 aa7.4□□□□□ -1.23
UBQLN1-206ENST00000533705 ATP2B3Q16720 1220 aa7.4□□□□□ -1.23
UBQLN1-206ENST00000533705 NCOA7Q8NI08 942 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms