RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	HCLS1	P14317	486 aa	Predicted RBP	18.74	■□□□□ 0.59
PPFIA1-222	ENST00000532504	TNN	Q9UQP3	1299 aa		18.74	■□□□□ 0.59
PPFIA1-222	ENST00000532504	G2E3	Q7L622	706 aa		18.74	■□□□□ 0.59
PPFIA1-222	ENST00000532504	NAPB	Q9H115	298 aa		18.74	■□□□□ 0.59
PPFIA1-222	ENST00000532504	DDX49	Q9Y6V7	483 aa	Known RBP	18.74	■□□□□ 0.59
PPFIA1-222	ENST00000532504	RIMBP2	O15034	1052 aa		18.73	■□□□□ 0.59
PPFIA1-222	ENST00000532504	TPD52L1	Q16890	204 aa	Predicted RBP	18.73	■□□□□ 0.59
PPFIA1-222	ENST00000532504	TET3	O43151	1660 aa		18.73	■□□□□ 0.59
PPFIA1-222	ENST00000532504	JAKMIP1	Q96N16	626 aa	Known RBP	18.73	■□□□□ 0.59
PPFIA1-222	ENST00000532504	IMMT	Q16891	758 aa	Known RBP	18.72	■□□□□ 0.59
PPFIA1-222	ENST00000532504	CDC42BPB	Q9Y5S2	1711 aa		18.72	■□□□□ 0.59
PPFIA1-222	ENST00000532504	USP6	P35125	1406 aa		18.72	■□□□□ 0.59
PPFIA1-222	ENST00000532504	ATP2B3	Q16720	1220 aa		18.72	■□□□□ 0.59
PPFIA1-222	ENST00000532504	BLOC1S2	Q6QNY1	142 aa		18.72	■□□□□ 0.59
PPFIA1-222	ENST00000532504	ARHGAP45	Q92619	1136 aa		18.72	■□□□□ 0.59
PPFIA1-222	ENST00000532504	CARD10	Q9BWT7	1032 aa		18.72	■□□□□ 0.59
PPFIA1-222	ENST00000532504	KCNQ3	O43525	872 aa		18.72	■□□□□ 0.59
PPFIA1-222	ENST00000532504	ECHDC1	Q9NTX5	307 aa		18.72	■□□□□ 0.59
PPFIA1-222	ENST00000532504	KIF1B	O60333	1816 aa		18.72	■□□□□ 0.59
PPFIA1-222	ENST00000532504	FAM135B	Q49AJ0	1406 aa		18.71	■□□□□ 0.59
PPFIA1-222	ENST00000532504	NPC1L1	Q9UHC9	1359 aa		18.71	■□□□□ 0.59
PPFIA1-222	ENST00000532504	SBNO2	Q9Y2G9	1366 aa		18.71	■□□□□ 0.59
PPFIA1-222	ENST00000532504	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.71	■□□□□ 0.59
PPFIA1-222	ENST00000532504	SHROOM2	Q13796	1616 aa		18.71	■□□□□ 0.59
PPFIA1-222	ENST00000532504	UNC5CL	Q8IV45	518 aa		18.71	■□□□□ 0.59
PPFIA1-222	ENST00000532504	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	18.71	■□□□□ 0.59
PPFIA1-222	ENST00000532504	KCNQ4	P56696	695 aa		18.71	■□□□□ 0.59
PPFIA1-222	ENST00000532504	SLF2	Q8IX21	1173 aa		18.71	■□□□□ 0.59
PPFIA1-222	ENST00000532504	INSR	P06213	1382 aa		18.71	■□□□□ 0.59
PPFIA1-222	ENST00000532504	ERVV-2	B6SEH9	535 aa		18.7	■□□□□ 0.58
PPFIA1-222	ENST00000532504	ADGRL3	Q9HAR2	1447 aa		18.7	■□□□□ 0.58
PPFIA1-222	ENST00000532504	KRT27	Q7Z3Y8	459 aa		18.7	■□□□□ 0.58
PPFIA1-222	ENST00000532504	JAG2	Q9Y219	1238 aa		18.7	■□□□□ 0.58
PPFIA1-222	ENST00000532504	RHPN1	Q8TCX5	695 aa		18.7	■□□□□ 0.58
PPFIA1-222	ENST00000532504	SPATA31A3	Q5VYP0	1347 aa		18.7	■□□□□ 0.58
PPFIA1-222	ENST00000532504	RBM26	Q5T8P6	1007 aa	Known RBP	18.7	■□□□□ 0.58
PPFIA1-222	ENST00000532504	TRIM35	Q9UPQ4	493 aa		18.7	■□□□□ 0.58
PPFIA1-222	ENST00000532504	SEPT12	Q8IYM1	358 aa		18.69	■□□□□ 0.58
PPFIA1-222	ENST00000532504	IL17RE	Q8NFR9	667 aa		18.69	■□□□□ 0.58
PPFIA1-222	ENST00000532504	CLEC11A	Q9Y240	323 aa		18.69	■□□□□ 0.58
PPFIA1-222	ENST00000532504	RANBP6	O60518	1105 aa	Known RBP	18.69	■□□□□ 0.58
PPFIA1-222	ENST00000532504	WDR17	Q8IZU2	1322 aa		18.69	■□□□□ 0.58
PPFIA1-222	ENST00000532504	PRPF40B	Q6NWY9	871 aa	Known RBP	18.69	■□□□□ 0.58
PPFIA1-222	ENST00000532504	TRIM22	Q8IYM9	498 aa		18.68	■□□□□ 0.58
PPFIA1-222	ENST00000532504	JDP2	Q8WYK2	163 aa		18.68	■□□□□ 0.58
PPFIA1-222	ENST00000532504	CHL1	O00533	1208 aa		18.68	■□□□□ 0.58
PPFIA1-222	ENST00000532504	RABEP1	Q15276	862 aa		18.68	■□□□□ 0.58
PPFIA1-222	ENST00000532504	PLBD2	Q8NHP8	589 aa		18.68	■□□□□ 0.58
PPFIA1-222	ENST00000532504	LDHC	P07864	332 aa		18.68	■□□□□ 0.58
PPFIA1-222	ENST00000532504	AFF2	P51816	1311 aa		18.67	■□□□□ 0.58
PPFIA1-222	ENST00000532504	GRM1	Q13255	1194 aa		18.67	■□□□□ 0.58
PPFIA1-222	ENST00000532504	ASAP1	Q9ULH1	1129 aa		18.67	■□□□□ 0.58
PPFIA1-222	ENST00000532504	OGFOD1	Q8N543	542 aa		18.67	■□□□□ 0.58
PPFIA1-222	ENST00000532504	ZNF287	Q9HBT7	754 aa		18.67	■□□□□ 0.58
PPFIA1-222	ENST00000532504	SH3TC1	Q8TE82	1336 aa		18.67	■□□□□ 0.58
PPFIA1-222	ENST00000532504	FAM196A	Q6ZSG2	479 aa		18.66	■□□□□ 0.58
PPFIA1-222	ENST00000532504	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.66	■□□□□ 0.58
PPFIA1-222	ENST00000532504	ERBB3	P21860	1342 aa		18.66	■□□□□ 0.58
PPFIA1-222	ENST00000532504	PDRG1	Q9NUG6	133 aa		18.66	■□□□□ 0.58
PPFIA1-222	ENST00000532504	USP16	Q9Y5T5	823 aa		18.66	■□□□□ 0.58
PPFIA1-222	ENST00000532504	DIP2C	Q9Y2E4	1556 aa		18.66	■□□□□ 0.58
PPFIA1-222	ENST00000532504	IL15	P40933	162 aa	Predicted RBP	18.66	■□□□□ 0.58
PPFIA1-222	ENST00000532504	SOGA3	Q5TF21	947 aa		18.66	■□□□□ 0.58
PPFIA1-222	ENST00000532504		U3KPZ7	1027 aa	Predicted RBP	18.66	■□□□□ 0.58
PPFIA1-222	ENST00000532504	CEBPZ	Q03701	1054 aa	Known RBP	18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	DDX11L8	A8MPP1	907 aa		18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	BAG3	O95817	575 aa		18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	EIF4A1	P60842	406 aa	Known RBP	18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	MYO1B	O43795	1136 aa		18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	UQCRFS1P1	P0C7P4	283 aa		18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	TTF1	Q15361	905 aa	Predicted RBP	18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	SPTY2D1	Q68D10	685 aa	Predicted RBP	18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	CCDC47	Q96A33	483 aa	Known RBP	18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	BICC1	Q9H694	974 aa	Known RBP	18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	CHMP5	Q9NZZ3	219 aa		18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	PTPRM	P28827	1452 aa		18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	WDR78	Q5VTH9	848 aa		18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	RBM17	Q96I25	401 aa	Known RBP	18.65	■□□□□ 0.58
PPFIA1-222	ENST00000532504	PARP10	Q53GL7	1025 aa		18.64	■□□□□ 0.58
PPFIA1-222	ENST00000532504	CAST	P20810	708 aa	Known RBP	18.64	■□□□□ 0.57
PPFIA1-222	ENST00000532504	LOC102724428	A0A0B4J2F2	783 aa		18.64	■□□□□ 0.57
PPFIA1-222	ENST00000532504	SIK1	P57059	783 aa		18.64	■□□□□ 0.57
PPFIA1-222	ENST00000532504	ATP8B2	P98198	1209 aa		18.64	■□□□□ 0.57
PPFIA1-222	ENST00000532504	CLTCL1	P53675	1640 aa		18.64	■□□□□ 0.57
PPFIA1-222	ENST00000532504	KIAA2012	Q0VF49	1180 aa		18.64	■□□□□ 0.57
PPFIA1-222	ENST00000532504	IQGAP3	Q86VI3	1631 aa		18.64	■□□□□ 0.57
PPFIA1-222	ENST00000532504	NUCB2	P80303	420 aa		18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	ZNF804A	Q7Z570	1209 aa		18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	METTL22	Q9BUU2	404 aa	Predicted RBP	18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	HSPA1L	P34931	641 aa		18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	UPF3B	Q9BZI7	483 aa	Known RBP	18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	BECN2	A8MW95	431 aa		18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	IGHD	P01880	384 aa		18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	ANKRD1	Q15327	319 aa		18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	RLBP1	P12271	317 aa		18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	HAND2	P61296	217 aa		18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	KRT32	Q14532	448 aa		18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	EVI5L	Q96CN4	794 aa		18.63	■□□□□ 0.57
PPFIA1-222	ENST00000532504	DIP2B	Q9P265	1576 aa		18.62	■□□□□ 0.57

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